Factsheet for VIT_09s0002g06550.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
cytosol 1
golgi 2
endoplasmic reticulum 4
extracellular 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56207	Soybean	endoplasmic reticulum	96.67	96.67
AT1G52600.1	Thale cress	endoplasmic reticulum	93.33	93.33
Solyc12g006540.1.1	Tomato	nucleus	92.22	92.22
CDY65907	Canola	cytosol, endoplasmic reticulum, golgi	92.22	92.22
CDY40147	Canola	cytosol, endoplasmic reticulum, golgi	92.22	92.22
Bra030372.1-P	Field mustard	endoplasmic reticulum	92.22	92.22
Bra018976.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	92.22	92.22
CDX87924	Canola	endoplasmic reticulum	91.67	91.67
CDY60554	Canola	endoplasmic reticulum	91.67	91.67
KRH02723	Soybean	endoplasmic reticulum	96.67	91.1
CDY70157	Canola	endoplasmic reticulum, golgi, vacuole	76.11	89.54
GSMUA_Achr2P06860_001	Banana	endoplasmic reticulum	89.44	89.44
Bra040958.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	75.0	88.24
Zm00001d037926_P001	Maize	endoplasmic reticulum	87.78	87.78
EES19438	Sorghum	endoplasmic reticulum	87.78	87.78
Os05t0297900-01	Rice	plasma membrane	87.22	87.22
CDY47542	Canola	endoplasmic reticulum	86.67	86.67
Os06t0273800-02	Rice	endoplasmic reticulum, golgi, plasma membrane	86.67	86.67
Bra021131.1-P	Field mustard	endoplasmic reticulum	86.11	86.11
CDY21864	Canola	endoplasmic reticulum	86.11	86.11
EES16720	Sorghum	plasma membrane	86.11	86.11
CDY20147	Canola	endoplasmic reticulum	86.11	86.11
Zm00001d009866_P004	Maize	endoplasmic reticulum	86.11	86.11
AT3G15710.1	Thale cress	endoplasmic reticulum	85.56	85.56
CDY30100	Canola	cytosol, endoplasmic reticulum, golgi	83.89	83.89
CDX97698	Canola	cytosol, endoplasmic reticulum, golgi	83.89	83.89
Bra027214.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	83.89	83.89
GSMUA_Achr8P30160_001	Banana	plasma membrane	80.56	80.56
VIT_11s0016g05130.t01	Wine grape	cytosol, golgi, plasma membrane	80.0	80.0
PGSC0003DMT400048805	Potato	plastid	83.33	73.53
HORVU1Hr1G057530.2	Barley	endoplasmic reticulum, plasma membrane, plastid	85.0	71.5
EES07797	Sorghum	endoplasmic reticulum	68.33	67.58
HORVU5Hr1G109380.2	Barley	cytosol, golgi, plasma membrane, plastid	85.56	62.86
TraesCS6D01G314000.1	Wheat	cytosol	40.0	51.06
TraesCS6A01G333000.2	Wheat	extracellular, golgi	39.44	48.97
TraesCS6D01G312400.1	Wheat	endoplasmic reticulum, golgi	41.11	48.68
TraesCS6D01G311800.1	Wheat	endoplasmic reticulum, golgi, vacuole	45.0	47.93
TraesCS6D01G313700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	44.44	47.34
TraesCS6A01G334600.1	Wheat	golgi	43.89	46.75
TraesCS6B01G363400.1	Wheat	endoplasmic reticulum, golgi, vacuole	43.89	46.75
Zm00001d032189_P001	Maize	extracellular, mitochondrion	20.56	46.25
TraesCS6D01G312200.1	Wheat	golgi	42.78	45.56
TraesCS3D01G089300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	41.67	44.38
Zm00001d051850_P001	Maize	endoplasmic reticulum	66.11	37.3

Protein Annotations

EntrezGene:100257730	wikigene:100257730	MapMan:18.10.1.1.1	ProteinID:CBI36300	ProteinID:CBI36300.3	UniProt:D7U104
EMBL:FN596494	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005787	GO:GO:0006465	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019538	EntrezGene:LOC100257730	wikigene:LOC100257730	InterPro:LexA/Signal_pep-like_sf	PFAM:PF00717	PRINTS:PR00728
PANTHER:PTHR10806	PANTHER:PTHR10806:SF16	InterPro:Peptidase_S24_S26A/B/C	InterPro:Peptidase_S26B	MEROPS:S26.010	SUPFAM:SSF51306
TIGR:TC57655	TIGRFAMs:TIGR02228	UniParc:UPI00015CD203	ArrayExpress:VIT_09s0002g06550	EnsemblPlantsGene:VIT_09s0002g06550	EnsemblPlants:VIT_09s0002g06550.t01
unigene:Vvi.12607	RefSeq:XP_002269449	RefSeq:XP_002269449.1	:	:	:

Description

Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:D7U104]

Coordinates

chr9:-:6477350..6485640

Molecular Weight (calculated)

19959.8 Da

IEP (calculated)

7.767

GRAVY (calculated)

0.316

Length

180 amino acids

Sequence
(BLAST)

001: MGWIGETVDS IKSIQIRQVL SQAVSLGMIV TSALIIWKAL MCITGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR EIPIVHRVIK
101: VHERQDTGEV DVLTKGDNNY GDDRLLYAHG QLWLQRHHIM GRAVGFLPYV GWVTIIMTEK PLIKYVLIGA LGLLVITSKD

Best Arabidopsis Sequence Match ( AT1G52600.1 )
(BLAST)

001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD

Arabidopsis Description

Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.