Factsheet for VIT_11s0016g05130.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

plastid 3
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g06550.t01	Wine grape	endoplasmic reticulum	80.0	80.0
GSMUA_Achr2P06860_001	Banana	endoplasmic reticulum	77.78	77.78
EES19438	Sorghum	endoplasmic reticulum	75.56	75.56
Os06t0273800-02	Rice	endoplasmic reticulum, golgi, plasma membrane	75.56	75.56
Zm00001d037926_P001	Maize	endoplasmic reticulum	75.56	75.56
Zm00001d009866_P004	Maize	endoplasmic reticulum	74.44	74.44
EES16720	Sorghum	plasma membrane	73.89	73.89
Os05t0297900-01	Rice	plasma membrane	73.89	73.89
GSMUA_Achr8P30160_001	Banana	plasma membrane	72.78	72.78
EES07797	Sorghum	endoplasmic reticulum	65.56	64.84
PGSC0003DMT400048805	Potato	plastid	71.11	62.75
HORVU1Hr1G057530.2	Barley	endoplasmic reticulum, plasma membrane, plastid	73.33	61.68
HORVU5Hr1G109380.2	Barley	cytosol, golgi, plasma membrane, plastid	74.44	54.69
KRH54892	Soybean	cytosol, extracellular, plasma membrane	29.44	53.54
TraesCS6D01G314000.1	Wheat	cytosol	35.56	45.39
TraesCS6A01G333000.2	Wheat	extracellular, golgi	36.11	44.83
TraesCS6D01G311800.1	Wheat	endoplasmic reticulum, golgi, vacuole	41.67	44.38
TraesCS6D01G312400.1	Wheat	endoplasmic reticulum, golgi	37.22	44.08
TraesCS6B01G363400.1	Wheat	endoplasmic reticulum, golgi, vacuole	41.11	43.79
TraesCS6D01G313700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	40.56	43.2
TraesCS6A01G334600.1	Wheat	golgi	40.56	43.2
TraesCS3D01G089300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	39.44	42.01
TraesCS6D01G312200.1	Wheat	golgi	38.89	41.42
Zm00001d032189_P001	Maize	extracellular, mitochondrion	17.78	40.0
Zm00001d051850_P001	Maize	endoplasmic reticulum	62.22	35.11

Protein Annotations

EntrezGene:100257568	wikigene:100257568	MapMan:18.10.1.1.1	ProteinID:CBI28184	ProteinID:CBI28184.3	UniProt:D7TBZ9
EMBL:FN595756	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005787	GO:GO:0006465	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019538	EntrezGene:LOC100257568	wikigene:LOC100257568	InterPro:LexA/Signal_pep-like_sf	PFAM:PF00717	PRINTS:PR00728
PANTHER:PTHR10806	PANTHER:PTHR10806:SF16	InterPro:Peptidase_S24_S26A/B/C	InterPro:Peptidase_S26B	MEROPS:S26.010	MEROPS:S26.A04
SUPFAM:SSF51306	TIGR:TC65512	TIGRFAMs:TIGR02228	UniParc:UPI000198422A	ArrayExpress:VIT_11s0016g05130	EnsemblPlantsGene:VIT_11s0016g05130
EnsemblPlants:VIT_11s0016g05130.t01	unigene:Vvi.11713	RefSeq:XP_002285131	RefSeq:XP_002285131.1	SEG:seg	:

Description

Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:D7TBZ9]

Coordinates

chr11:-:4403929..4419218

Molecular Weight (calculated)

20010.9 Da

IEP (calculated)

8.496

GRAVY (calculated)

0.252

Length

180 amino acids

Sequence
(BLAST)

001: MGLIGESMDS IKTLQIRSTL SQAATLGMIV ASALMIWKGL ICITGSSSPV VVVLSGSMEP GFKRGDILFL RMTKDPIRTG EIVVFNVDGK DIPIVHRVIE
101: VHERQDNGEV DVLTKGDHNP KDDRFLYPYG QLWLQRHHIM GRAVGFLPHV GWVTIIMTEK PVVKYILIGV MALLFITSKE

Best Arabidopsis Sequence Match ( AT1G52600.1 )
(BLAST)

001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD

Arabidopsis Description

Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.