CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

plastid 1
mitochondrion 1
extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56207	Soybean	endoplasmic reticulum	91.5	77.78
GSMUA_Achr2P06860_001	Banana	endoplasmic reticulum	88.89	75.56
KRH02723	Soybean	endoplasmic reticulum	92.16	73.82
Zm00001d037926_P001	Maize	endoplasmic reticulum	84.97	72.22
EES19438	Sorghum	endoplasmic reticulum	84.97	72.22
Os06t0273800-02	Rice	endoplasmic reticulum, golgi, plasma membrane	84.31	71.67
Zm00001d009866_P004	Maize	endoplasmic reticulum	83.66	71.11
Os05t0297900-01	Rice	plasma membrane	83.01	70.56
EES16720	Sorghum	plasma membrane	82.35	70.0
PGSC0003DMT400048805	Potato	plastid	90.85	68.14
GSMUA_Achr8P30160_001	Banana	plasma membrane	79.74	67.78
HORVU1Hr1G057530.2	Barley	endoplasmic reticulum, plasma membrane, plastid	83.01	59.35
EES07797	Sorghum	endoplasmic reticulum	70.59	59.34
HORVU5Hr1G109380.2	Barley	cytosol, golgi, plasma membrane, plastid	82.35	51.43
TraesCS6D01G314000.1	Wheat	cytosol	43.14	46.81
KRH54892	Soybean	cytosol, extracellular, plasma membrane	30.07	46.46
TraesCS6A01G333000.2	Wheat	extracellular, golgi	43.79	46.21
TraesCS6D01G312400.1	Wheat	endoplasmic reticulum, golgi	45.1	45.39
Zm00001d032189_P001	Maize	extracellular, mitochondrion	22.22	42.5
TraesCS6A01G334600.1	Wheat	golgi	45.75	41.42
TraesCS6D01G311800.1	Wheat	endoplasmic reticulum, golgi, vacuole	45.75	41.42
TraesCS6D01G313700.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	45.75	41.42
TraesCS6B01G363400.1	Wheat	endoplasmic reticulum, golgi, vacuole	45.1	40.83
TraesCS6D01G312200.1	Wheat	golgi	44.44	40.24
TraesCS3D01G089300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	43.79	39.65
Zm00001d051850_P001	Maize	endoplasmic reticulum	66.67	31.97

Protein Annotations

MapMan:18.10.1.1.1	Gene3D:2.10.109.10	EMBL:ACUP02009109	EnsemblPlantsGene:GLYMA_15G009200	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005787
GO:GO:0006465	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019538	UniProt:K7M8T7	EnsemblPlants:KRH09745
ProteinID:KRH09745	ProteinID:KRH09745.1	InterPro:LexA/Signal_pep-like_sf	PFAM:PF00717	PRINTS:PR00728	PANTHER:PTHR10806
PANTHER:PTHR10806:SF16	InterPro:Peptidase_S24_S26A/B/C	InterPro:Peptidase_S26B	MEROPS:S26.A04	SUPFAM:SSF51306	SignalP:SignalP-noTM
TIGRFAMs:TIGR02228	UniParc:UPI000296604E	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:719183..721370

Molecular Weight (calculated)

17243.5 Da

IEP (calculated)

7.162

GRAVY (calculated)

0.331

Length

153 amino acids

Sequence
(BLAST)

001: MIVTSALIIW KALMCITGSE SPVVVVLSES MEPGFKRGDI LFLHMNRDPI RAGEIVVFNV DGREIPIVHR VIMVHDRKDT GEVDVLTKGD KNDVDDRLLY
101: VHGQLWLQRH HVMGRAVGFL PYVGWVTIIM TEKPIIKYIL ISALGLLVIT SKD

Best Arabidopsis Sequence Match ( AT1G52600.1 )
(BLAST)

001: MGWIGETVDS IKSIQIRQLF TQAISLGMIV TSALIIWKAL MCVTGSESPV VVVLSGSMEP GFKRGDILFL HMSKDPIRAG EIVVFNVDGR DIPIVHRVIK
101: VHERENTGEV DVLTKGDNNY GDDRLLYAEG QLWLHRHHIM GRAVGFLPYV GWVTIIMTEK PIIKYILIGA LGLLVITSKD

Arabidopsis Description

Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:Q9SSR2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.