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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • mitochondrion 2
  • nucleus 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G049500.1 Wheat nucleus 99.32 99.32
TraesCS6B01G049000.1 Wheat nucleus 98.63 98.63
TraesCS6B01G049200.1 Wheat nucleus 98.63 98.63
TraesCS6B01G049400.1 Wheat nucleus 98.63 98.63
TraesCS6B01G082400.1 Wheat nucleus 98.63 98.63
TraesCS6B01G048300.1 Wheat nucleus 97.26 96.6
TraesCS6A01G035200.1 Wheat nucleus 96.58 95.92
TraesCS6B01G048700.1 Wheat nucleus 96.58 95.92
TraesCS6D01G040300.1 Wheat nucleus 95.21 94.56
HORVU6Hr1G005940.1 Barley nucleus 93.15 75.14
TraesCS6A01G075400.1 Wheat unclear 69.86 71.33
TraesCS2A01G214700.1 Wheat mitochondrion 62.33 67.41
TraesCS1A01G132400.1 Wheat mitochondrion 49.32 51.8
Solyc06g084430.2.1 Tomato plasma membrane 32.88 49.48
CDY51246 Canola plastid 36.3 24.09
Protein Annotations
Gene3D:1.10.20.10MapMan:12.1.2GO:GO:0000786GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0046982InterPro:Histone-foldInterPro:Histone_H2AInterPro:Histone_H2A/H2B/H3InterPro:Histone_H2A_CInterPro:Histone_H2A_CS
InterPro:IPR009072PFAM:PF00125PFAM:PF16211PRINTS:PR00620ScanProsite:PS00046PANTHER:PTHR23430
PANTHER:PTHR23430:SF192SMART:SM00414SUPFAM:SSF47113EnsemblPlantsGene:TraesCS6A01G035100EnsemblPlants:TraesCS6A01G035100.1TIGR:cd00074
SEG:seg:::::
Description
No Description!
Coordinates
chr6A:-:16719650..16720182
Molecular Weight (calculated)
15631.4 Da
IEP (calculated)
11.360
GRAVY (calculated)
-0.404
Length
146 amino acids
Sequence
(BLAST)
001: MAGRKGGDRK KAVTRSVKAG LQFPVGRIGR YLKKGRYAQR VGSGAPVYLA AVLEYLAAEV LELAGNAAKD NKKTRIIPRH LLLAVRNDQE LGRLLAGVTI
101: AHGGVIPNIN SVLLPKKSPA TAEKEAKSPK KKTTTKSPKK KVAAKE
Best Arabidopsis Sequence Match ( AT1G51060.1 )
(BLAST)
001: MAGRGKTLGS GSAKKATTRS SKAGLQFPVG RIARFLKKGK YAERVGAGAP VYLAAVLEYL AAEVLELAGN AARDNKKTRI VPRHIQLAVR NDEELSKLLG
101: DVTIANGGVM PNIHNLLLPK KTGASKPSAE DD
Arabidopsis Description
HTA10Probable histone H2A.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C681]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.