Factsheet for TraesCS2A01G214700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G239700.1	Wheat	mitochondrion	99.26	99.26
HORVU2Hr1G043860.1	Barley	nucleus	98.52	98.52
KRH27119	Soybean	nucleus	85.93	85.93
Bra029498.1-P	Field mustard	mitochondrion	62.96	70.83
CDY23443	Canola	mitochondrion	62.22	70.0
Solyc05g014880.1.1	Tomato	nucleus	44.44	68.18
CDY11491	Canola	mitochondrion	40.74	63.95
TraesCS6A01G035200.1	Wheat	nucleus	68.15	62.59
PGSC0003DMT400089480	Potato	nucleus	62.96	62.5
TraesCS6A01G035100.1	Wheat	nucleus	67.41	62.33
Solyc05g014800.1.1	Tomato	nucleus	58.52	58.52
PGSC0003DMT400091186	Potato	mitochondrion	58.52	58.09
PGSC0003DMT400094846	Potato	mitochondrion, nucleus	58.52	58.09
GSMUA_Achr2P01530_001	Banana	endoplasmic reticulum, plasma membrane	45.19	57.55
Solyc05g014890.1.1	Tomato	mitochondrion	55.56	55.56
PGSC0003DMT400095704	Potato	mitochondrion	56.3	55.47
TraesCS6A01G075400.1	Wheat	unclear	58.52	55.24
TraesCS1A01G132400.1	Wheat	mitochondrion	54.07	52.52
Solyc05g014870.1.1	Tomato	nucleus	40.74	52.38
PGSC0003DMT400087364	Potato	mitochondrion	52.59	52.21
Solyc05g014860.1.1	Tomato	cytosol, mitochondrion, nucleus, plastid	50.37	51.91
PGSC0003DMT400094421	Potato	endoplasmic reticulum, mitochondrion	46.67	49.22
PGSC0003DMT400090970	Potato	nucleus	47.41	47.76
PGSC0003DMT400088887	Potato	endoplasmic reticulum, extracellular	41.48	47.06
PGSC0003DMT400094311	Potato	extracellular	38.52	44.83
PGSC0003DMT400086553	Potato	endoplasmic reticulum, extracellular	39.26	42.74
Solyc05g014850.1.1	Tomato	cytosol, nucleus, peroxisome, plastid	54.07	41.71
Solyc05g014940.1.1	Tomato	nucleus	42.22	39.86
Solyc05g014810.1.1	Tomato	mitochondrion	43.7	39.07
Solyc05g014830.1.1	Tomato	nucleus	51.11	23.63

Protein Annotations

Gene3D:1.10.20.10	MapMan:12.1.2	GO:GO:0000786	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0046982	InterPro:Histone-fold	InterPro:Histone_H2A	InterPro:Histone_H2A/H2B/H3	InterPro:Histone_H2A_C	InterPro:Histone_H2A_CS
InterPro:IPR009072	PFAM:PF00125	PFAM:PF16211	PRINTS:PR00620	ScanProsite:PS00046	PANTHER:PTHR23430
PANTHER:PTHR23430:SF95	SMART:SM00414	SUPFAM:SSF47113	EnsemblPlantsGene:TraesCS2A01G214700	EnsemblPlants:TraesCS2A01G214700.1	TIGR:cd00074
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:200919473..200920151

Molecular Weight (calculated)

14105.0 Da

IEP (calculated)

10.719

GRAVY (calculated)

-0.222

Length

135 amino acids

Sequence
(BLAST)

001: MAGRGKAIGT GAAKKATSRS SKAGLQFPVG RIARFLKAGK YAERVGAGAP VYLAAVLEYL AAEVLELAGN AARDNKKTRI VPRHIQLAVR NDEELTKLLG
101: GATIASGGVM PNIHQHLLPK KASSSKASTV DDDDN

Best Arabidopsis Sequence Match ( AT4G27230.2 )
(BLAST)

001: MAGRGKQLGS GAAKKSTSRS SKAGLQFPVG RIARFLKAGK YAERVGAGAP VYLAAVLEYL AAEVLELAGN AARDNKKTRI VPRHIQLAVR NDEELSKLLG
101: DVTIANGGVM PNIHNLLLPK KAGSSKPTEE D

Arabidopsis Description

HTA2Probable histone H2A.3 [Source:UniProtKB/Swiss-Prot;Acc:O81826]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.