Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G444700.1 | Wheat | cytosol | 95.59 | 95.87 |
| HORVU6Hr1G092480.4 | Barley | cytosol | 89.41 | 85.88 |
| Os02t0822200-01 | Rice | cytosol | 83.24 | 85.5 |
| TraesCS6D01G386100.1 | Wheat | cytosol | 83.24 | 74.28 |
| KXG31437 | Sorghum | vacuole | 79.71 | 74.25 |
| Zm00001d018512_P001 | Maize | cytosol | 76.76 | 71.51 |
| TraesCS6A01G147800.1 | Wheat | cytosol | 57.94 | 60.06 |
| CDY54444 | Canola | cytosol, plastid, vacuole | 7.35 | 53.19 |
Protein Annotations
| Gene3D:1.20.58.860 | MapMan:19.2.2.1.2.1 | MapMan:19.2.2.3.2.1 | MapMan:19.2.6.2.3 | Gene3D:3.40.532.10 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004843 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016579 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR036959 | PFAM:PF01088 | PIRSF:PIRSF038120 |
| PRINTS:PR00707 | PANTHER:PTHR10589 | PANTHER:PTHR10589:SF30 | InterPro:Papain_like_cys_pep_sf | InterPro:Peptidase_C12_UCH | InterPro:Peptidase_C12_UCH_sf |
| SUPFAM:SSF54001 | EnsemblPlantsGene:TraesCS6A01G402500 | EnsemblPlants:TraesCS6A01G402500.1 | InterPro:Ubiquitinyl_hydrolase_UCH37 | TIGR:cd09617 | SEG:seg |
Description
No Description!
Coordinates
chr6A:-:610349084..610351842
Molecular Weight (calculated)
38104.5 Da
IEP (calculated)
4.654
GRAVY (calculated)
-0.330
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWCTIESDP GVFTELIQEM QVKGVQVEEL YSLDVDSLSQ LQPVYGLIFL FKWMPGGNDE RPVVSDPNPN LFFARQVITN ACATQAILSI LMNRPEIDIG
101: PELSNLKEFT GAFAPDMKGL AINNSDSIRA AHNSFARPEP FVSDEQKAAT KDDEVYHFIS YIPFEGVLYE LDGLKEGPIS LGQYPGGPED LGWLQMVQPV
201: IQERIERYSQ SEIRFNLMAI IKNRKDVYTA ELKELEKKRE QILQELSNEA TAAAEKESLN GTLAEVALAV EAVGEKIAME EEKFRKWKTE NVRRKHNYIP
301: FLFNLLKALA EKKQLTPLVE KARQQKAPAT AGASASASTS
101: PELSNLKEFT GAFAPDMKGL AINNSDSIRA AHNSFARPEP FVSDEQKAAT KDDEVYHFIS YIPFEGVLYE LDGLKEGPIS LGQYPGGPED LGWLQMVQPV
201: IQERIERYSQ SEIRFNLMAI IKNRKDVYTA ELKELEKKRE QILQELSNEA TAAAEKESLN GTLAEVALAV EAVGEKIAME EEKFRKWKTE NVRRKHNYIP
301: FLFNLLKALA EKKQLTPLVE KARQQKAPAT AGASASASTS
001: MSWCTIESDP GVFTELIQQM QVKGVQVEEL YSLDSDSLNN LRPVYGLIFL FKWQAGEKDE RPTIQDQVSN LFFANQVINN ACATQAILAI LLNSPEVDIG
101: PELSALKEFT KNFPSDLKGL AINNSDSIRA AHNSFARPEP FVPEEQKAAT KDDDVYHFIS YIPVDGVLYE LDGLKEGPIS LGPCPGDQTG IEWLQMVQPV
201: IQERIERYSQ SEIRFNLLAV IKNRKDIYTA ELKELQRQRE QLLQQANTCV DKSEAEAVNA LIAEVGSGIE AASDKIVMEE EKFMKWRTEN IRRKHNYIPF
301: LFNFLKLLAE KKQLKPLIEK AKKQKTESST
101: PELSALKEFT KNFPSDLKGL AINNSDSIRA AHNSFARPEP FVPEEQKAAT KDDDVYHFIS YIPVDGVLYE LDGLKEGPIS LGPCPGDQTG IEWLQMVQPV
201: IQERIERYSQ SEIRFNLLAV IKNRKDIYTA ELKELQRQRE QLLQQANTCV DKSEAEAVNA LIAEVGSGIE AASDKIVMEE EKFMKWRTEN IRRKHNYIPF
301: LFNFLKLLAE KKQLKPLIEK AKKQKTESST
Arabidopsis Description
UCH2Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178WM46]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.