Factsheet for Os02t0822200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G402500.1	Wheat	cytosol	85.5	83.24
TraesCS6B01G444700.1	Wheat	cytosol	85.2	83.19
KXG31437	Sorghum	vacuole	85.8	77.81
Zm00001d018512_P001	Maize	cytosol	83.38	75.62
HORVU6Hr1G092480.4	Barley	cytosol	79.46	74.29
Os02t0180100-01	Rice	nucleus	64.35	64.74
TraesCS6D01G386100.1	Wheat	cytosol	74.32	64.57
CDY54444	Canola	cytosol, plastid, vacuole	8.46	59.57

Protein Annotations

Gene3D:1.20.58.860	MapMan:19.2.2.1.2.1	MapMan:19.2.2.3.2.1	MapMan:19.2.6.2.3	Gene3D:3.40.532.10	EntrezGene:4331185
EMBL:AK058380	ProteinID:BAD22892.1	ProteinID:BAD23124.1	ProteinID:BAF10471.1	ProteinID:BAS81641.1	MEROPS:C12.A01
ncoils:Coil	ProteinID:EAZ25121.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004843	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006508	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0009056	GO:GO:0009987
GO:GO:0016579	GO:GO:0016787	GO:GO:0019538	GO:GO:0036459	InterPro:IPR036959	EnsemblPlantsGene:Os02g0822200
EnsemblPlants:Os02t0822200-01	PFAM:PF01088	PIRSF:PIRSF038120	PRINTS:PR00707	PANTHER:PTHR10589	PANTHER:PTHR10589:SF30
InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C12_UCH	InterPro:Peptidase_C12_UCH_sf	UniProt:Q6K6Z5	SUPFAM:SSF54001	UniParc:UPI00003B0492
InterPro:Ubiquitinyl_hydrolase_UCH37	RefSeq:XP_015627467.1	RefSeq:XP_015627468.1	SEG:seg	:	:

Description

Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 family protein. (Os02t0822200-01);Similar to UCH2; ubiquitin thiolesterase/ ubiquitin-specific protease. (Os02t0822200-02)

Coordinates

chr2:+:35293420..35296454

Molecular Weight (calculated)

37798.2 Da

IEP (calculated)

4.849

GRAVY (calculated)

-0.420

Length

331 amino acids

Sequence
(BLAST)

001: MSWCTIESDP GVFTELIQEM QVKGVQVEEL YSLDVDSISE LRPVYGLIFL FKWMAGEKDE RPVVKDPNPN LFFASQVIPN ACATQAILSI LMNRPEIDIG
101: PELSNLKEFT GAFAPDMKGL AINNSDSIRT AHNSFARPEP FVSDEQRAAG KDDEVYHFIS YLPFEGVLYE LDGLKEGPIS LGQCSGGPDD LDWLRMVQPV
201: IQKRIERYSQ SEIRFNLMAI IKNRKDVYTA ELKELEKRRD QLLQEMNESS AAESLNSELA EVTSAIETVS EKIIMEEEKF KKWRTENIRR KHNYIPFLFN
301: FLKMLAEKKQ LKPLVEKAKQ QKASSTSTSA R

Best Arabidopsis Sequence Match ( AT1G65650.1 )
(BLAST)

001: MSWCTIESDP GVFTELIQQM QVKGVQVEEL YSLDSDSLNN LRPVYGLIFL FKWQAGEKDE RPTIQDQVSN LFFANQVINN ACATQAILAI LLNSPEVDIG
101: PELSALKEFT KNFPSDLKGL AINNSDSIRA AHNSFARPEP FVPEEQKAAT KDDDVYHFIS YIPVDGVLYE LDGLKEGPIS LGPCPGDQTG IEWLQMVQPV
201: IQERIERYSQ SEIRFNLLAV IKNRKDIYTA ELKELQRQRE QLLQQANTCV DKSEAEAVNA LIAEVGSGIE AASDKIVMEE EKFMKWRTEN IRRKHNYIPF
301: LFNFLKLLAE KKQLKPLIEK AKKQKTESST

Arabidopsis Description

UCH2Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178WM46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.