Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15505 | Sorghum | cytosol | 47.34 | 48.11 |
| Zm00001d046887_P001 | Maize | cytosol | 41.49 | 36.28 |
| TraesCS5D01G321200.1 | Wheat | cytosol | 20.21 | 14.18 |
| TraesCS7D01G270700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 19.68 | 13.12 |
| TraesCS1D01G274800.1 | Wheat | cytosol | 17.55 | 11.96 |
| TraesCS5D01G142500.1 | Wheat | mitochondrion | 15.43 | 9.27 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G405400.1 | EnsemblPlantsGene:TraesCS6D01G405400 | InterPro:LRAT-like_dom | PANTHER:PTHR13943 | PANTHER:PTHR13943:SF41 | PFAM:PF04970 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:472672379..472673851
Molecular Weight (calculated)
20874.3 Da
IEP (calculated)
8.810
GRAVY (calculated)
-0.091
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRGVTLSSS RIDRCQLRRD HIYTWRKSAL NVYSHHGIYE SDSKVIHFTM SCSPTQTCWD CAQANRKGGV IITCLDCFLG TGDICLFAYS VPLWFHAMAN
101: PGIQVTCSME PQDPPETVLH RANKLLADGF GMHFALYCKT GHHTKQSVIK LHPAPAILGI NYPSRPLGKA VATFALTASL IKSFGKHH
101: PGIQVTCSME PQDPPETVLH RANKLLADGF GMHFALYCKT GHHTKQSVIK LHPAPAILGI NYPSRPLGKA VATFALTASL IKSFGKHH
001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT
Arabidopsis Description
At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.