Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15505 | Sorghum | cytosol | 46.98 | 54.59 |
| TraesCS6D01G405400.1 | Wheat | cytosol | 36.28 | 41.49 |
| Zm00001d006180_P001 | Maize | cytosol | 17.67 | 14.18 |
| Zm00001d021248_P002 | Maize | cytosol | 17.67 | 14.18 |
| Zm00001d052741_P001 | Maize | cytosol | 17.67 | 13.38 |
| Zm00001d031737_P001 | Maize | cytosol | 17.67 | 13.1 |
| Zm00001d021614_P001 | Maize | mitochondrion | 16.74 | 11.73 |
Protein Annotations
| EnsemblPlants:Zm00001d046887_P001 | EnsemblPlants:Zm00001d046887_T001 | EnsemblPlantsGene:Zm00001d046887 | InterPro:LRAT-like_dom | PANTHER:PTHR13943 | PANTHER:PTHR13943:SF41 |
| PFAM:PF04970 | ProteinID:AQL05147.1 | SEG:seg | UniParc:UPI000843DE9F | UniProt:A0A1D6P5C1 | MapMan:35.2 |
Description
NC domain-containing protein-related
Coordinates
chr9:+:108878757..108880778
Molecular Weight (calculated)
23993.2 Da
IEP (calculated)
6.491
GRAVY (calculated)
-0.043
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDRGVTVL SSRIERWQLR RGDHIYAWRT GYSHHGIYES DEKVIHFTSA SAQSSGFFSS SSSAAFSSHS KCREAMRGGG VVVCCLDCFL EGDNLCLFAY
101: SVSMAFAALS NIGAQDTCSV VDEDPPDTVL RRANDFLDYG GFRSYNVAGN NCFHFAYYCK TGREYLSPQV VLSILAYVIT YVILSKDIEK GYCEGSLART
201: SICLFYALRK FIYSS
101: SVSMAFAALS NIGAQDTCSV VDEDPPDTVL RRANDFLDYG GFRSYNVAGN NCFHFAYYCK TGREYLSPQV VLSILAYVIT YVILSKDIEK GYCEGSLART
201: SICLFYALRK FIYSS
001: MDSHFLEKIG FISNQISRDK LKPGDHIYSW RNAYIYSHHG IYIGDEKVIH FTCGGGLETG TGTFLDKIVV SVIPNHKGDN PCSNCEEQLN LEGVISSCLD
101: CFLAGGNIYL FEYSVSPAAF IAKPRRGTCT IAPSDPCDEV ISRAKYLLLR NGFGDYHALE NNCEDFAIYC KTSLLVGKDY VLGRGGQASS VSAAAWLAQL
201: SPFGSKAIQL FADIGMRKDA IKVPVESLVP RAYATGTSRN RR
101: CFLAGGNIYL FEYSVSPAAF IAKPRRGTCT IAPSDPCDEV ISRAKYLLLR NGFGDYHALE NNCEDFAIYC KTSLLVGKDY VLGRGGQASS VSAAAWLAQL
201: SPFGSKAIQL FADIGMRKDA IKVPVESLVP RAYATGTSRN RR
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FFF0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.