Factsheet for Zm00001d021614_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36301	Sorghum	cytosol	86.97	95.02
Os05t0310600-01	Rice	cytosol	68.73	75.09
GSMUA_Achr7P05990_001	Banana	cytosol	57.65	69.69
KRG98048	Soybean	cytosol	54.4	68.72
HORVU5Hr1G043560.3	Barley	mitochondrion	66.78	68.56
VIT_04s0069g01180.t01	Wine grape	cytosol	53.42	67.21
KRH17250	Soybean	cytosol	54.72	66.14
TraesCS5D01G142500.1	Wheat	mitochondrion	66.45	65.18
Solyc02g081580.2.1	Tomato	cytosol	53.09	60.37
AT3G02700.1	Thale cress	cytosol	48.53	59.13
PGSC0003DMT400045756	Potato	cytosol	51.79	58.89
TraesCS5A01G135900.1	Wheat	mitochondrion	66.45	58.79
KRG98046	Soybean	cytosol	28.01	57.33
KRH30737	Soybean	cytosol	46.58	56.97
Bra021419.1-P	Field mustard	cytosol	49.51	56.93
KRH30736	Soybean	cytosol, peroxisome, plastid	36.81	56.5
CDX78682	Canola	cytosol	43.0	55.46
CDX70686	Canola	cytosol	43.32	55.42
CDY67201	Canola	cytosol	43.65	55.14
VIT_00s0270g00030.t01	Wine grape	cytosol	49.84	54.84
CDX69451	Canola	cytosol	45.6	54.26
CDY53737	Canola	cytosol	49.84	54.26
CDY55574	Canola	cytosol	44.63	54.15
CDX85508	Canola	cytosol	36.16	53.11
CDY38122	Canola	cytosol	44.3	51.91
AT5G16330.1	Thale cress	cytosol	40.72	51.65
CDY38121	Canola	cytosol	38.11	51.32
Bra008622.1-P	Field mustard	cytosol	41.04	50.81
CDY55575	Canola	cytosol	41.04	49.61
Bra023561.1-P	Field mustard	cytosol	41.69	49.04
Bra023560.1-P	Field mustard	cytosol	45.28	47.93
CDY72287	Canola	cytosol	40.72	47.89
Bra008623.1-P	Field mustard	cytosol	44.95	47.42
AT5G16360.1	Thale cress	cytosol	43.32	47.0
Zm00001d021248_P002	Maize	cytosol	40.72	46.64
Zm00001d006180_P001	Maize	cytosol	39.74	45.52
CDX70687	Canola	plastid	38.44	44.7
CDX78683	Canola	cytosol	43.65	44.52
Zm00001d031737_P001	Maize	cytosol	39.41	41.72
Zm00001d052741_P001	Maize	cytosol	38.11	41.2
KRG98047	Soybean	cytosol, golgi, peroxisome	9.45	26.13
Zm00001d046887_P001	Maize	cytosol	11.73	16.74

Protein Annotations

EMBL:BT041851	EnsemblPlants:Zm00001d021614_P001	EnsemblPlants:Zm00001d021614_T001	EnsemblPlantsGene:Zm00001d021614	EntrezGene:100191352	InterPro:LRAT-like_dom
PANTHER:PTHR13943	PANTHER:PTHR13943:SF32	PFAM:PF04970	ProteinID:ONM57671.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI00017B7DEA	UniProt:B4FXL3	MapMan:35.2	:	:	:

Description

NC domain-containing protein-related

Coordinates

chr7:+:158107602..158111238

Molecular Weight (calculated)

32444.8 Da

IEP (calculated)

6.293

GRAVY (calculated)

0.272

Length

307 amino acids

Sequence
(BLAST)

001: MLHRLIWSGA GGGAIAGVLI AAGGRGMVGV LSNRVDRDDL KAGDHIYTWR AAYIYAHHGI YAGDGMVIHF TRAAGHEIGT GTFLDWFLYS SSPAATEGPP
101: CQKCGHLVKS DGVITSCLDC FLDGGSLYLF DYAVSPAFFL AKARGGTCTL AASDPSDVVI HRARYLLDNG FGMYSLFKNN CEDFAIYCKT GLLVETAFSV
201: GRSGQLASLT AAFSAVASSP LRFLTTSAGG LAIVTSGMYC VGRYVSDIGV RRDVVKVPVE RLVEQNVTWI PQCVATETDI AAGAPQQQLE VPCAVAEEAS
301: VIQPAAP

Best Arabidopsis Sequence Match ( AT3G02700.1 )
(BLAST)

001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT

Arabidopsis Description

At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.