Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021614_P001 | Maize | mitochondrion | 95.02 | 86.97 |
| Os05t0310600-01 | Rice | cytosol | 73.67 | 73.67 |
| GSMUA_Achr7P05990_001 | Banana | cytosol | 62.28 | 68.9 |
| KRG98048 | Soybean | cytosol | 59.43 | 68.72 |
| HORVU5Hr1G043560.3 | Barley | mitochondrion | 72.6 | 68.23 |
| VIT_04s0069g01180.t01 | Wine grape | cytosol | 58.36 | 67.21 |
| KRH17250 | Soybean | cytosol | 59.07 | 65.35 |
| TraesCS5D01G142500.1 | Wheat | mitochondrion | 71.17 | 63.9 |
| Solyc02g081580.2.1 | Tomato | cytosol | 58.01 | 60.37 |
| AT3G02700.1 | Thale cress | cytosol | 53.02 | 59.13 |
| PGSC0003DMT400045756 | Potato | cytosol | 56.23 | 58.52 |
| TraesCS5A01G135900.1 | Wheat | mitochondrion | 71.53 | 57.93 |
| KRG98046 | Soybean | cytosol | 30.61 | 57.33 |
| KRH30737 | Soybean | cytosol | 50.89 | 56.97 |
| Bra021419.1-P | Field mustard | cytosol | 54.09 | 56.93 |
| KRH30736 | Soybean | cytosol, peroxisome, plastid | 40.21 | 56.5 |
| CDX78682 | Canola | cytosol | 46.98 | 55.46 |
| VIT_00s0270g00030.t01 | Wine grape | cytosol | 54.8 | 55.2 |
| CDY67201 | Canola | cytosol | 47.69 | 55.14 |
| CDX70686 | Canola | cytosol | 46.62 | 54.58 |
| CDX69451 | Canola | cytosol | 49.82 | 54.26 |
| CDY53737 | Canola | cytosol | 54.45 | 54.26 |
| CDY55574 | Canola | cytosol | 48.4 | 53.75 |
| CDX85508 | Canola | cytosol | 39.15 | 52.63 |
| AT5G16330.1 | Thale cress | cytosol | 44.48 | 51.65 |
| EES19605 | Sorghum | cytosol | 50.53 | 51.64 |
| CDY38122 | Canola | cytosol | 47.69 | 51.15 |
| CDY38121 | Canola | cytosol | 41.28 | 50.88 |
| Bra008622.1-P | Field mustard | cytosol | 44.48 | 50.4 |
| CDY55575 | Canola | cytosol | 44.48 | 49.21 |
| Bra023561.1-P | Field mustard | cytosol | 45.55 | 49.04 |
| CDY72287 | Canola | cytosol | 44.48 | 47.89 |
| Bra023560.1-P | Field mustard | cytosol | 49.11 | 47.59 |
| Bra008623.1-P | Field mustard | cytosol | 49.11 | 47.42 |
| AT5G16360.1 | Thale cress | cytosol | 47.33 | 47.0 |
| EER99225 | Sorghum | cytosol | 44.48 | 46.64 |
| CDX70687 | Canola | plastid | 41.64 | 44.32 |
| CDX78683 | Canola | cytosol | 47.33 | 44.19 |
| EES14126 | Sorghum | nucleus | 46.26 | 43.33 |
| KRG98047 | Soybean | cytosol, golgi, peroxisome | 10.32 | 26.13 |
| EES15505 | Sorghum | cytosol | 14.59 | 22.16 |
Protein Annotations
| EnsemblPlants:KXG36301 | EnsemblPlantsGene:SORBI_3002G315700 | InterPro:LRAT-like_dom | PANTHER:PTHR13943 | PANTHER:PTHR13943:SF32 | PFAM:PF04970 |
| ProteinID:KXG36301 | ProteinID:KXG36301.1 | ProteinID:KXG36302.1 | ProteinID:OQU89998.1 | SEG:seg | UniParc:UPI0001C80E5D |
| UniProt:A0A1B6QEE0 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:68916138..68918530
Molecular Weight (calculated)
30069.8 Da
IEP (calculated)
6.294
GRAVY (calculated)
0.157
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGVLSNRVD RDDLKAGDHI YTWRAAYIYA HHGIYAGHGM VIHFTRAAGH EIGTGTFLDW FLYSSSPAAT EGPPCQKCGH LVKSDGVITS CLDCFLDGGS
101: LYLFDYAVSP AFFLAKARGG TCTLAASDPS DVVIHRARYL LDNGFGMYSL FKNNCEDFAI YCKTGLLVET AFSVGRSGQL ASLTAAFSAV ASSPLRFLTT
201: SAGGLAIVTS GMYCVGRYVS DIGVRRDVVK VPVERLVEQN VTSIPQSRAT ETDITSGAPQ QQMEVPCVVA EEASIIPPTA P
101: LYLFDYAVSP AFFLAKARGG TCTLAASDPS DVVIHRARYL LDNGFGMYSL FKNNCEDFAI YCKTGLLVET AFSVGRSGQL ASLTAAFSAV ASSPLRFLTT
201: SAGGLAIVTS GMYCVGRYVS DIGVRRDVVK VPVERLVEQN VTSIPQSRAT ETDITSGAPQ QQMEVPCVVA EEASIIPPTA P
001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT
Arabidopsis Description
At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.