Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra021419.1-P | Field mustard | cytosol | 92.55 | 97.75 |
AT3G02700.1 | Thale cress | cytosol | 78.01 | 87.3 |
VIT_04s0069g01180.t01 | Wine grape | cytosol | 59.57 | 68.85 |
KRG98048 | Soybean | cytosol | 59.22 | 68.72 |
CDX78682 | Canola | cytosol | 52.48 | 62.18 |
CDX70686 | Canola | cytosol | 52.13 | 61.25 |
CDX85508 | Canola | cytosol | 44.33 | 59.81 |
KRH30736 | Soybean | cytosol, peroxisome, plastid | 42.2 | 59.5 |
CDY38122 | Canola | cytosol | 54.96 | 59.16 |
GSMUA_Achr7P05990_001 | Banana | cytosol | 52.84 | 58.66 |
Solyc02g081580.2.1 | Tomato | cytosol | 56.03 | 58.52 |
CDY67201 | Canola | cytosol | 50.0 | 58.02 |
KRH30737 | Soybean | cytosol | 51.42 | 57.77 |
PGSC0003DMT400045756 | Potato | cytosol | 54.61 | 57.04 |
KRG98046 | Soybean | cytosol | 30.14 | 56.67 |
CDX69451 | Canola | cytosol | 51.77 | 56.59 |
CDY55574 | Canola | cytosol | 50.35 | 56.13 |
VIT_00s0270g00030.t01 | Wine grape | cytosol | 54.96 | 55.56 |
KXG36301 | Sorghum | cytosol | 54.26 | 54.45 |
CDY55575 | Canola | cytosol | 48.94 | 54.33 |
CDX81002 | Canola | cytosol | 50.0 | 54.23 |
CDY55757 | Canola | cytosol | 49.65 | 53.85 |
CDY38121 | Canola | cytosol | 43.26 | 53.51 |
Os05t0310600-01 | Rice | cytosol | 53.19 | 53.38 |
CDY72287 | Canola | cytosol | 47.16 | 50.96 |
HORVU5Hr1G043560.3 | Barley | mitochondrion | 53.55 | 50.5 |
CDX70687 | Canola | plastid | 46.81 | 50.0 |
Zm00001d021614_P001 | Maize | mitochondrion | 54.26 | 49.84 |
CDX78683 | Canola | cytosol | 52.84 | 49.5 |
TraesCS5D01G142500.1 | Wheat | mitochondrion | 51.77 | 46.65 |
CDY51720 | Canola | cytosol | 40.78 | 46.56 |
CDY37998 | Canola | cytosol | 43.26 | 45.35 |
CDY07154 | Canola | cytosol | 39.01 | 44.18 |
TraesCS5A01G135900.1 | Wheat | mitochondrion | 53.9 | 43.8 |
KRG98047 | Soybean | cytosol, golgi, peroxisome | 10.64 | 27.03 |
Protein Annotations
EnsemblPlants:CDY53737 | EnsemblPlantsGene:GSBRNA2T00011321001 | InterPro:LRAT-like_dom | KEGG:00261+3.4.-.- | KEGG:00310+3.4.-.- | KEGG:00550+3.4.-.- |
KEGG:00780+3.4.-.- | PANTHER:PTHR13943 | PANTHER:PTHR13943:SF32 | PFAM:PF04970 | ProteinID:CDY53737 | ProteinID:CDY53737.1 |
SEG:seg | UniParc:UPI0004EEC789 | UniProt:A0A078IUQ5 | MapMan:35.2 | : | : |
Description
BnaAnng12650DBnaAnng12650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUQ5]
Coordinates
chrLK033233:-:2178..3670
Molecular Weight (calculated)
30331.0 Da
IEP (calculated)
5.011
GRAVY (calculated)
-0.091
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFLSNKIAR DEVKPGDHIY SWRQAYVYAH HGIYVGEGQV NHFTRGDGQE TGTGTFLDNL IVSSSLNHGD TPCPNCGDRT KVGGVISSCL DCFLAGGDLY
101: VFEYSVSPAI FLAKPRGGTC TIGASDPPEE VIHRANFLLR NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVVLSS PLRFVAGFGS
201: LAVAGYGMYC ASRLVSDIGM RWDVSKVPVE RLVADMDDLA GMETKPEERL VADMAGMETK PEERLVADMA GMETKPEEKK TS
101: VFEYSVSPAI FLAKPRGGTC TIGASDPPEE VIHRANFLLR NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVVLSS PLRFVAGFGS
201: LAVAGYGMYC ASRLVSDIGM RWDVSKVPVE RLVADMDDLA GMETKPEERL VADMAGMETK PEERLVADMA GMETKPEEKK TS
001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT
Arabidopsis Description
At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.