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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra021419.1-P Field mustard cytosol 92.55 97.75
AT3G02700.1 Thale cress cytosol 78.01 87.3
VIT_04s0069g01180.t01 Wine grape cytosol 59.57 68.85
KRG98048 Soybean cytosol 59.22 68.72
CDX78682 Canola cytosol 52.48 62.18
CDX70686 Canola cytosol 52.13 61.25
CDX85508 Canola cytosol 44.33 59.81
KRH30736 Soybean cytosol, peroxisome, plastid 42.2 59.5
CDY38122 Canola cytosol 54.96 59.16
GSMUA_Achr7P05990_001 Banana cytosol 52.84 58.66
Solyc02g081580.2.1 Tomato cytosol 56.03 58.52
CDY67201 Canola cytosol 50.0 58.02
KRH30737 Soybean cytosol 51.42 57.77
PGSC0003DMT400045756 Potato cytosol 54.61 57.04
KRG98046 Soybean cytosol 30.14 56.67
CDX69451 Canola cytosol 51.77 56.59
CDY55574 Canola cytosol 50.35 56.13
VIT_00s0270g00030.t01 Wine grape cytosol 54.96 55.56
KXG36301 Sorghum cytosol 54.26 54.45
CDY55575 Canola cytosol 48.94 54.33
CDX81002 Canola cytosol 50.0 54.23
CDY55757 Canola cytosol 49.65 53.85
CDY38121 Canola cytosol 43.26 53.51
Os05t0310600-01 Rice cytosol 53.19 53.38
CDY72287 Canola cytosol 47.16 50.96
HORVU5Hr1G043560.3 Barley mitochondrion 53.55 50.5
CDX70687 Canola plastid 46.81 50.0
Zm00001d021614_P001 Maize mitochondrion 54.26 49.84
CDX78683 Canola cytosol 52.84 49.5
TraesCS5D01G142500.1 Wheat mitochondrion 51.77 46.65
CDY51720 Canola cytosol 40.78 46.56
CDY37998 Canola cytosol 43.26 45.35
CDY07154 Canola cytosol 39.01 44.18
TraesCS5A01G135900.1 Wheat mitochondrion 53.9 43.8
KRG98047 Soybean cytosol, golgi, peroxisome 10.64 27.03
Protein Annotations
EnsemblPlants:CDY53737EnsemblPlantsGene:GSBRNA2T00011321001InterPro:LRAT-like_domKEGG:00261+3.4.-.-KEGG:00310+3.4.-.-KEGG:00550+3.4.-.-
KEGG:00780+3.4.-.-PANTHER:PTHR13943PANTHER:PTHR13943:SF32PFAM:PF04970ProteinID:CDY53737ProteinID:CDY53737.1
SEG:segUniParc:UPI0004EEC789UniProt:A0A078IUQ5MapMan:35.2::
Description
BnaAnng12650DBnaAnng12650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUQ5]
Coordinates
chrLK033233:-:2178..3670
Molecular Weight (calculated)
30331.0 Da
IEP (calculated)
5.011
GRAVY (calculated)
-0.091
Length
282 amino acids
Sequence
(BLAST)
001: MGFLSNKIAR DEVKPGDHIY SWRQAYVYAH HGIYVGEGQV NHFTRGDGQE TGTGTFLDNL IVSSSLNHGD TPCPNCGDRT KVGGVISSCL DCFLAGGDLY
101: VFEYSVSPAI FLAKPRGGTC TIGASDPPEE VIHRANFLLR NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVVLSS PLRFVAGFGS
201: LAVAGYGMYC ASRLVSDIGM RWDVSKVPVE RLVADMDDLA GMETKPEERL VADMAGMETK PEERLVADMA GMETKPEEKK TS
Best Arabidopsis Sequence Match ( AT3G02700.1 )
(BLAST)
001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT
Arabidopsis Description
At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.