Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51720 | Canola | cytosol | 91.57 | 92.31 |
| AT4G00905.1 | Thale cress | cytosol | 83.94 | 79.47 |
| PGSC0003DMT400000664 | Potato | cytosol | 71.89 | 70.47 |
| Solyc01g096150.2.1 | Tomato | cytosol | 71.89 | 70.47 |
| CDY37998 | Canola | cytosol | 75.5 | 69.89 |
| KRG97211 | Soybean | cytosol | 71.89 | 69.11 |
| KRH68934 | Soybean | cytosol | 71.08 | 68.6 |
| Solyc05g050520.2.1 | Tomato | cytosol | 69.08 | 67.45 |
| VIT_15s0046g00120.t01 | Wine grape | cytosol | 70.68 | 67.18 |
| GSMUA_Achr9P00880_001 | Banana | cytosol | 62.65 | 57.78 |
| Zm00001d006180_P001 | Maize | cytosol | 60.24 | 55.97 |
| EER99225 | Sorghum | cytosol | 60.24 | 55.97 |
| Os09t0526800-01 | Rice | cytosol | 60.24 | 55.97 |
| Zm00001d021248_P002 | Maize | cytosol | 59.84 | 55.6 |
| TraesCS5A01G314900.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 59.44 | 55.22 |
| TraesCS5B01G315900.1 | Wheat | cytosol | 59.44 | 55.22 |
| TraesCS5D01G321200.1 | Wheat | cytosol | 59.44 | 55.22 |
| HORVU7Hr1G056880.1 | Barley | cytosol | 58.23 | 51.6 |
| TraesCS7B01G168500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 58.23 | 51.42 |
| TraesCS7A01G270500.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 57.83 | 51.06 |
| TraesCS7D01G270700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 57.83 | 51.06 |
| Os08t0546900-01 | Rice | cytosol, plasma membrane | 51.0 | 48.47 |
| Zm00001d052741_P001 | Maize | cytosol | 54.62 | 47.89 |
| EES14126 | Sorghum | nucleus | 57.03 | 47.33 |
| Zm00001d031737_P001 | Maize | cytosol | 54.22 | 46.55 |
| CDY55757 | Canola | cytosol | 47.79 | 45.77 |
| CDX81002 | Canola | cytosol | 47.79 | 45.77 |
| CDY55574 | Canola | cytosol | 44.98 | 44.27 |
| CDY67201 | Canola | cytosol | 42.97 | 44.03 |
| CDY38122 | Canola | cytosol | 46.18 | 43.89 |
| CDX69451 | Canola | cytosol | 44.98 | 43.41 |
| CDX78682 | Canola | cytosol | 41.37 | 43.28 |
| CDX85508 | Canola | cytosol | 35.74 | 42.58 |
| CDX70686 | Canola | cytosol | 40.56 | 42.08 |
| CDY38121 | Canola | cytosol | 38.15 | 41.67 |
| CDY53737 | Canola | cytosol | 44.18 | 39.01 |
| HORVU5Hr1G080870.3 | Barley | plastid | 52.61 | 38.99 |
| CDY55575 | Canola | cytosol | 39.76 | 38.98 |
| CDY72287 | Canola | cytosol | 40.56 | 38.7 |
| CDX70687 | Canola | plastid | 38.15 | 35.98 |
| CDX78683 | Canola | cytosol | 43.37 | 35.88 |
Protein Annotations
| EnsemblPlants:CDY07154 | EnsemblPlantsGene:GSBRNA2T00123509001 | InterPro:LRAT-like_dom | PANTHER:PTHR13943 | PANTHER:PTHR13943:SF73 | PFAM:PF04970 |
| ProteinID:CDY07154 | ProteinID:CDY07154.1 | SEG:seg | UniParc:UPI0004EE374C | MapMan:35.2 | : |
Description
BnaCnng01690D
Coordinates
chrLK031975:+:555747..557010
Molecular Weight (calculated)
26895.2 Da
IEP (calculated)
8.313
GRAVY (calculated)
-0.073
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLITNKVDR DELKPGDHIY TYRAVFAYSH HGVFVGGCKV VHFKPEQSLK ASSSSTASSE VNNDSSSSEP PCPTYPDCGF KQPNSGVLLS CLDCFLKNGS
101: LYRFTYGVSS SMFLTRVRGG TCTTAPSDPF QTVVHRSMHL LQNGFGNYDI FQNNCEDFAL YCKTGLLILD KNGVGRSGQA SSILGAPLAA LLSSPLTLLI
201: PNPVGVATVT AGMYCMSRYA TDIGVRTDVI KVPVEDLALN LGTKTLKKR
101: LYRFTYGVSS SMFLTRVRGG TCTTAPSDPF QTVVHRSMHL LQNGFGNYDI FQNNCEDFAL YCKTGLLILD KNGVGRSGQA SSILGAPLAA LLSSPLTLLI
201: PNPVGVATVT AGMYCMSRYA TDIGVRTDVI KVPVEDLALN LGTKTLKKR
001: MGVLTNKVER DELKPGDHIY TYRAVFAYSH HGVFVGGCKV VHFKPEHSLI SPTLASSSSS SSSSVSEVND SSEAPCPTYP DCGYKRPKSG VVLSCLDCFL
101: KKGSLYRFDY GVSSSIFLTR FRGGTCTTAP SDPLQTVIHR AMHLLQNGFG NYNVFQNNCE DFALYCKTGL LILDKNGVGR SGQASSIIGA PLAALLSSPL
201: TLLIPNPVGV ATVTAGMYCM SRYATDIGVR NDVIKVPVED LALNLGLKPL KRKRKACDTS ISR
101: KKGSLYRFDY GVSSSIFLTR FRGGTCTTAP SDPLQTVIHR AMHLLQNGFG NYNVFQNNCE DFALYCKTGL LILDKNGVGR SGQASSIIGA PLAALLSSPL
201: TLLIPNPVGV ATVTAGMYCM SRYATDIGVR NDVIKVPVED LALNLGLKPL KRKRKACDTS ISR
Arabidopsis Description
NC domain-containing protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q3EAE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.