Factsheet for TraesCS7D01G270700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G168500.1	Wheat	cytosol, mitochondrion, nucleus, plastid	95.04	95.04
TraesCS7A01G270500.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	94.33	94.33
HORVU7Hr1G056880.1	Barley	cytosol	88.65	88.97
Os08t0546900-01	Rice	cytosol, plasma membrane	71.28	76.72
EES14126	Sorghum	nucleus	75.89	71.33
TraesCS5D01G321200.1	Wheat	cytosol	66.31	69.78
GSMUA_Achr9P00880_001	Banana	cytosol	63.83	66.67
Zm00001d052741_P001	Maize	cytosol	65.96	65.49
PGSC0003DMT400000664	Potato	cytosol	56.38	62.6
Solyc01g096150.2.1	Tomato	cytosol	56.38	62.6
VIT_15s0046g00120.t01	Wine grape	cytosol	57.09	61.45
Solyc05g050520.2.1	Tomato	cytosol	55.32	61.18
Zm00001d031737_P001	Maize	cytosol	62.06	60.34
KRH68934	Soybean	cytosol	54.96	60.08
AT1G01225.1	Thale cress	cytosol	55.32	60.0
CDY51720	Canola	cytosol	52.48	59.92
KRG97211	Soybean	cytosol	54.96	59.85
Bra032627.1-P	Field mustard	cytosol	55.32	59.77
Bra037403.1-P	Field mustard	cytosol	51.77	58.63
CDY37998	Canola	cytosol	55.32	57.99
CDY07154	Canola	cytosol	51.06	57.83
AT4G00905.1	Thale cress	cytosol	51.06	54.75
PGSC0003DMT400012897	Potato	mitochondrion, nucleus	54.26	54.64
Solyc12g055850.1.1	Tomato	cytosol	53.9	53.15
TraesCS1D01G274800.1	Wheat	cytosol	47.52	48.55
TraesCS5D01G142500.1	Wheat	mitochondrion	46.1	41.53
TraesCS6D01G405400.1	Wheat	cytosol	13.12	19.68

Protein Annotations

EnsemblPlants:TraesCS7D01G270700.1	EnsemblPlantsGene:TraesCS7D01G270700	InterPro:LRAT-like_dom	PANTHER:PTHR13943	PANTHER:PTHR13943:SF43	PFAM:PF04970
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:257109034..257111310

Molecular Weight (calculated)

30397.6 Da

IEP (calculated)

8.387

GRAVY (calculated)

-0.063

Length

282 amino acids

Sequence
(BLAST)

001: MGLLSHRVER SELKPGDHIY TWRAAYSYSH HGIYVGGSKV VHFTTKKEAG TAGLDSAMAI SSLISAGSPE CPTFPDCGFQ LPDSGVILTC LDCFLRDGAL
101: HGFEYGVPPA VFLAKLRGGT CTTAASDPAD AVVHRAMYLL QNGFGSYDVF ENNCEDFALY CKTGLLLPPE QGIGTSGQAA SAVGVPLAAL FSTPFRLMSA
201: GPLGMAAVTA GMYCAGRYIT DIGVRKDVVK VEVENLSAHL GWRRAKAKEE EWVKKKQQPA KVTRLLPLKR KRDSDLHLQS VK

Best Arabidopsis Sequence Match ( AT1G01225.1 )
(BLAST)

001: MGLLTNKIER EELKPGDHIY TYRAIFAYSH HGIFVGGSKV VHFRPEHNPM DSSTSSISSS SSEDICSIFP DCGFRQPDSG VVLSCLDCFL KNGSLYCFEY
101: GVSPSVFLTK VRGGTCTTAQ SDTTDSVIHR AMYLLQNGFG NYDIFKNNCE DFALYCKTGL LIMDKLGVGR SGQASSIVGA PLAALLSSPF KLLIPSPIGV
201: ATVTAGMYCM SRYATDIGVR SDVIKVSVED LALNLDVKTI EQGEEEEEDE EEDSDTDYVR

Arabidopsis Description

At1g01225 [Source:UniProtKB/TrEMBL;Acc:Q29PY0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.