Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G168500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 91.81 | 91.49 |
| TraesCS7A01G270500.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 90.75 | 90.43 |
| TraesCS7D01G270700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 88.97 | 88.65 |
| Os08t0546900-01 | Rice | cytosol, plasma membrane | 72.24 | 77.48 |
| EES14126 | Sorghum | nucleus | 76.16 | 71.33 |
| GSMUA_Achr9P00880_001 | Banana | cytosol | 65.48 | 68.15 |
| Zm00001d052741_P001 | Maize | cytosol | 67.26 | 66.55 |
| Solyc01g096150.2.1 | Tomato | cytosol | 56.58 | 62.6 |
| PGSC0003DMT400000664 | Potato | cytosol | 56.58 | 62.6 |
| VIT_15s0046g00120.t01 | Wine grape | cytosol | 58.01 | 62.21 |
| Solyc05g050520.2.1 | Tomato | cytosol | 55.52 | 61.18 |
| KRG97211 | Soybean | cytosol | 56.23 | 61.0 |
| Zm00001d031737_P001 | Maize | cytosol | 62.63 | 60.69 |
| CDY51720 | Canola | cytosol | 53.02 | 60.32 |
| AT1G01225.1 | Thale cress | cytosol | 55.52 | 60.0 |
| KRH68934 | Soybean | cytosol | 54.8 | 59.69 |
| Bra032627.1-P | Field mustard | cytosol | 55.16 | 59.39 |
| Bra037403.1-P | Field mustard | cytosol | 52.31 | 59.04 |
| CDY07154 | Canola | cytosol | 51.6 | 58.23 |
| CDY37998 | Canola | cytosol | 54.8 | 57.25 |
| AT4G00905.1 | Thale cress | cytosol | 51.25 | 54.75 |
| PGSC0003DMT400012897 | Potato | mitochondrion, nucleus | 54.09 | 54.29 |
| Solyc12g055850.1.1 | Tomato | cytosol | 53.38 | 52.45 |
| HORVU1Hr1G074130.1 | Barley | cytosol | 49.11 | 50.18 |
| HORVU5Hr1G080870.3 | Barley | plastid | 58.01 | 48.51 |
| HORVU5Hr1G043560.3 | Barley | mitochondrion | 46.62 | 43.81 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G056880.1 | EnsemblPlantsGene:HORVU7Hr1G056880 | InterPro:LRAT-like_dom | PANTHER:PTHR13943 | PANTHER:PTHR13943:SF43 | PFAM:PF04970 |
| UniParc:UPI000B477958 | UniProt:A0A287WLH6 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:242006017..242009505
Molecular Weight (calculated)
30175.4 Da
IEP (calculated)
8.552
GRAVY (calculated)
-0.019
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLLSHRVER SELKPGDHIY TWRAAYSYSH HGIYVGGSKV VHFTTKKEAG TAGLDSAVAI SSLISAGSPE CPTFPDCGFQ LPDSGVILTC LDCFLRDGAL
101: HGFEYGVPPA VFLAKLRGGT CTTAASDPAD AVVHRAMYLL QNGFGSYDVF ENNCEDFALY CKTGLLLPPE QGIGRSGQAA SAVGVPLAAL FSTPFRLMSA
201: GPLGMAAVTA GMYCAGRYIT DIGVRKDVVK VEVENLSAHL GWRRAKAEEV LVKKKQQPGK VTRLLPLKRK RDSDLHLQSV K
101: HGFEYGVPPA VFLAKLRGGT CTTAASDPAD AVVHRAMYLL QNGFGSYDVF ENNCEDFALY CKTGLLLPPE QGIGRSGQAA SAVGVPLAAL FSTPFRLMSA
201: GPLGMAAVTA GMYCAGRYIT DIGVRKDVVK VEVENLSAHL GWRRAKAEEV LVKKKQQPGK VTRLLPLKRK RDSDLHLQSV K
001: MGLLTNKIER EELKPGDHIY TYRAIFAYSH HGIFVGGSKV VHFRPEHNPM DSSTSSISSS SSEDICSIFP DCGFRQPDSG VVLSCLDCFL KNGSLYCFEY
101: GVSPSVFLTK VRGGTCTTAQ SDTTDSVIHR AMYLLQNGFG NYDIFKNNCE DFALYCKTGL LIMDKLGVGR SGQASSIVGA PLAALLSSPF KLLIPSPIGV
201: ATVTAGMYCM SRYATDIGVR SDVIKVSVED LALNLDVKTI EQGEEEEEDE EEDSDTDYVR
101: GVSPSVFLTK VRGGTCTTAQ SDTTDSVIHR AMYLLQNGFG NYDIFKNNCE DFALYCKTGL LIMDKLGVGR SGQASSIVGA PLAALLSSPF KLLIPSPIGV
201: ATVTAGMYCM SRYATDIGVR SDVIKVSVED LALNLDVKTI EQGEEEEEDE EEDSDTDYVR
Arabidopsis Description
At1g01225 [Source:UniProtKB/TrEMBL;Acc:Q29PY0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.