CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97211	Soybean	cytosol	90.31	89.96
VIT_15s0046g00120.t01	Wine grape	cytosol	77.13	75.95
Solyc01g096150.2.1	Tomato	cytosol	73.26	74.41
PGSC0003DMT400000664	Potato	cytosol	73.26	74.41
CDY51720	Canola	cytosol	68.99	72.06
Bra032627.1-P	Field mustard	cytosol	72.09	71.26
CDY07154	Canola	cytosol	68.6	71.08
Solyc05g050520.2.1	Tomato	cytosol	70.16	70.98
AT1G01225.1	Thale cress	cytosol	71.32	70.77
Bra037403.1-P	Field mustard	cytosol	68.22	70.68
AT4G00905.1	Thale cress	cytosol	70.93	69.58
CDY37998	Canola	cytosol	71.71	68.77
GSMUA_Achr9P00880_001	Banana	cytosol	66.67	63.7
Zm00001d021248_P002	Maize	cytosol	63.18	60.82
EER99225	Sorghum	cytosol	63.18	60.82
Os09t0526800-01	Rice	cytosol	62.79	60.45
Zm00001d006180_P001	Maize	cytosol	61.63	59.33
TraesCS5D01G321200.1	Wheat	cytosol	60.47	58.21
TraesCS5B01G315900.1	Wheat	cytosol	60.08	57.84
TraesCS5A01G314900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	60.08	57.84
TraesCS7D01G270700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	60.08	54.96
HORVU7Hr1G056880.1	Barley	cytosol	59.69	54.8
TraesCS7B01G168500.1	Wheat	cytosol, mitochondrion, nucleus, plastid	59.3	54.26
TraesCS7A01G270500.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	59.3	54.26
Os08t0546900-01	Rice	cytosol, plasma membrane	51.94	51.15
EES14126	Sorghum	nucleus	59.3	51.0
Zm00001d052741_P001	Maize	cytosol	55.04	50.0
KRG98048	Soybean	cytosol	46.9	49.79
Zm00001d031737_P001	Maize	cytosol	55.04	48.97
KRH72187	Soybean	cytosol	46.9	46.72
KRH32851	Soybean	cytosol	46.9	46.72
KRH17250	Soybean	cytosol	45.74	46.46
KRH30737	Soybean	cytosol	42.25	43.43
KRH30736	Soybean	cytosol, peroxisome, plastid	33.33	43.0
KRG98046	Soybean	cytosol	24.81	42.67
HORVU5Hr1G080870.3	Barley	plastid	52.71	40.48
KRG98047	Soybean	cytosol, golgi, peroxisome	8.14	18.92

Protein Annotations

EMBL:ACUP02002128	EnsemblPlants:KRH68934	EnsemblPlantsGene:GLYMA_03G258900	InterPro:LRAT-like_dom	PANTHER:PTHR13943	PANTHER:PTHR13943:SF32
PFAM:PF04970	ProteinID:KRH68934	ProteinID:KRH68934.1	UniParc:UPI00023C2163	UniProt:I1JS14	MapMan:35.2

Description

hypothetical protein

Coordinates

chr3:-:45322712..45326472

Molecular Weight (calculated)

28467.9 Da

IEP (calculated)

6.381

GRAVY (calculated)

-0.172

Length

258 amino acids

Sequence
(BLAST)

001: MGLLSNRVER HEIKPGDHIY TYRAVFTYSH HGIFVGGSKV VHFRPERNLK SMTETSSNWD DPTSNPCPTF PDCGFRQPNC GVVLSCLDCF LRNGSLYCFE
101: YEVSPSVFLS RIRGGTCTTA SADPPETVIH RAMYLLQNGF GNYNVFQNNC EDFALYCKTG LLIQDKQGVG RSGQASSVIG APLAAMITSP LKLLMPSPVG
201: VATVTAGMYC MSRYATDIGV RSDVIKVPVE DLAVNLGWTC QEEEIAEHET SDRQITTR

Best Arabidopsis Sequence Match ( AT1G01225.1 )
(BLAST)

001: MGLLTNKIER EELKPGDHIY TYRAIFAYSH HGIFVGGSKV VHFRPEHNPM DSSTSSISSS SSEDICSIFP DCGFRQPDSG VVLSCLDCFL KNGSLYCFEY
101: GVSPSVFLTK VRGGTCTTAQ SDTTDSVIHR AMYLLQNGFG NYDIFKNNCE DFALYCKTGL LIMDKLGVGR SGQASSIVGA PLAALLSSPF KLLIPSPIGV
201: ATVTAGMYCM SRYATDIGVR SDVIKVSVED LALNLDVKTI EQGEEEEEDE EEDSDTDYVR

Arabidopsis Description

At1g01225 [Source:UniProtKB/TrEMBL;Acc:Q29PY0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.