Factsheet for TraesCS5A01G314900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, peroxisome, mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 2
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G321200.1	Wheat	cytosol	94.78	94.78
TraesCS5B01G315900.1	Wheat	cytosol	94.03	94.03
Zm00001d021248_P002	Maize	cytosol	84.7	84.7
EER99225	Sorghum	cytosol	84.7	84.7
Zm00001d006180_P001	Maize	cytosol	84.33	84.33
Os09t0526800-01	Rice	cytosol	82.09	82.09
GSMUA_Achr9P00880_001	Banana	cytosol	67.91	67.41
HORVU5Hr1G080870.3	Barley	plastid	84.33	67.26
TraesCS7A01G270500.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	68.28	64.89
Solyc01g096150.2.1	Tomato	cytosol	60.82	64.17
PGSC0003DMT400000664	Potato	cytosol	60.45	63.78
VIT_15s0046g00120.t01	Wine grape	cytosol	61.19	62.6
Solyc05g050520.2.1	Tomato	cytosol	58.96	61.96
Bra032627.1-P	Field mustard	cytosol	59.7	61.3
AT1G01225.1	Thale cress	cytosol	58.96	60.77
KRH68934	Soybean	cytosol	57.84	60.08
CDY51720	Canola	cytosol	55.22	59.92
KRG97211	Soybean	cytosol	57.84	59.85
CDY07154	Canola	cytosol	55.22	59.44
Bra037403.1-P	Field mustard	cytosol	55.22	59.44
CDY37998	Canola	cytosol	59.33	59.11
AT4G00905.1	Thale cress	cytosol	56.34	57.41
PGSC0003DMT400012897	Potato	mitochondrion, nucleus	57.46	55.0
Solyc12g055850.1.1	Tomato	cytosol	55.97	52.45
TraesCS1A01G275200.1	Wheat	cytosol	47.76	46.38
TraesCS5A01G135900.1	Wheat	mitochondrion	43.28	33.43

Protein Annotations

EnsemblPlants:TraesCS5A01G314900.1	EnsemblPlantsGene:TraesCS5A01G314900	Gene3D:3.90.1720.10	InterPro:LRAT-like_dom	PANTHER:PTHR13943	PANTHER:PTHR13943:SF43
PFAM:PF04970	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr5A:-:525123023..525125501

Molecular Weight (calculated)

29187.0 Da

IEP (calculated)

7.940

GRAVY (calculated)

-0.066

Length

268 amino acids

Sequence
(BLAST)

001: MGLLSNRVER SEVRPGDHIY TWRAVYAYSH HGIYVGGSKV VHFTRKKEVE SSDSSNFISG LISQASSECP TFPDCGFQLA DSGVVLTCLD CFLGNGSLYC
101: FEYGVPPAIF LAKFRGGTCT IAQSDPSEVV VRRAMHLLQN GFGNYDMFEK NCEDFALYCK TGLVPVDEPG IGVSGQASSA IGVPLAALLS TPFKIFAAGP
201: LGMATVTAGM YCAGRYITDI GVRKDVAKVE VENLSSHLGF RRVEDTESVN RSSDKVKKLL PLKRKRER

Best Arabidopsis Sequence Match ( AT1G01225.1 )
(BLAST)

001: MGLLTNKIER EELKPGDHIY TYRAIFAYSH HGIFVGGSKV VHFRPEHNPM DSSTSSISSS SSEDICSIFP DCGFRQPDSG VVLSCLDCFL KNGSLYCFEY
101: GVSPSVFLTK VRGGTCTTAQ SDTTDSVIHR AMYLLQNGFG NYDIFKNNCE DFALYCKTGL LIMDKLGVGR SGQASSIVGA PLAALLSSPF KLLIPSPIGV
201: ATVTAGMYCM SRYATDIGVR SDVIKVSVED LALNLDVKTI EQGEEEEEDE EEDSDTDYVR

Arabidopsis Description

At1g01225 [Source:UniProtKB/TrEMBL;Acc:Q29PY0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.