Factsheet for Bra032627.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37998	Canola	cytosol	95.02	92.19
AT1G01225.1	Thale cress	cytosol	85.82	86.15
Bra037403.1-P	Field mustard	cytosol	71.65	75.1
KRG97211	Soybean	cytosol	72.8	73.36
PGSC0003DMT400000664	Potato	cytosol	70.88	72.83
VIT_15s0046g00120.t01	Wine grape	cytosol	72.41	72.14
KRH68934	Soybean	cytosol	71.26	72.09
Solyc01g096150.2.1	Tomato	cytosol	70.11	72.05
Solyc05g050520.2.1	Tomato	cytosol	67.43	69.02
GSMUA_Achr9P00880_001	Banana	cytosol	63.98	61.85
EER99225	Sorghum	cytosol	62.84	61.19
Zm00001d021248_P002	Maize	cytosol	62.07	60.45
Os09t0526800-01	Rice	cytosol	62.07	60.45
TraesCS5D01G321200.1	Wheat	cytosol	61.3	59.7
TraesCS5A01G314900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	61.3	59.7
Zm00001d006180_P001	Maize	cytosol	61.3	59.7
TraesCS5B01G315900.1	Wheat	cytosol	60.92	59.33
TraesCS7B01G168500.1	Wheat	cytosol, mitochondrion, nucleus, plastid	59.77	55.32
TraesCS7D01G270700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	59.77	55.32
HORVU7Hr1G056880.1	Barley	cytosol	59.39	55.16
TraesCS7A01G270500.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	59.39	54.96
Os08t0546900-01	Rice	cytosol, plasma membrane	51.34	51.15
EES14126	Sorghum	nucleus	57.47	50.0
Zm00001d052741_P001	Maize	cytosol	53.64	49.3
Zm00001d031737_P001	Maize	cytosol	52.87	47.59
Bra005893.1-P	Field mustard	cytosol	47.13	47.31
Bra021419.1-P	Field mustard	cytosol	46.36	45.32
HORVU5Hr1G080870.3	Barley	plastid	54.41	42.26
Bra008622.1-P	Field mustard	cytosol	39.08	41.13
Bra008623.1-P	Field mustard	cytosol	44.44	39.86
Bra023561.1-P	Field mustard	cytosol	39.85	39.85
Bra023560.1-P	Field mustard	cytosol	43.68	39.31

Protein Annotations

EnsemblPlants:Bra032627.1	EnsemblPlants:Bra032627.1-P	EnsemblPlantsGene:Bra032627	InterPro:LRAT-like_dom	PANTHER:PTHR13943	PANTHER:PTHR13943:SF32
PFAM:PF04970	SEG:seg	UniParc:UPI00025430FF	UniProt:M4EUZ4	MapMan:35.2	:

Description

AT1G01225 (E=8e-124) | NC domain-containing protein-related

Coordinates

chrA09:+:36915653..36916683

Molecular Weight (calculated)

28393.5 Da

IEP (calculated)

4.663

GRAVY (calculated)

-0.085

Length

261 amino acids

Sequence
(BLAST)

001: MGLLTNKVER EELKAGDHIY TYRAVFAYSH HGIFVGGSKV VHFRPEHNLN SSSSSPMESF TSASSSSEDI CPTFPDCGFR QPNSGVVLSC LDCFLKNGSL
101: YCFEYGVSPS VFLTKVRGGT CTTAQSDPTD SVIHRAMYLL QNGFGNYDIF KNNCEDFALY CKTGLLIMDK LGVGRSGQAS SIVGAPLAAV LSSPFSLLIP
201: NPIGVATVTA GMYCMSRYAT DIGVRRDVVK VSVEDLALNL DVKSIEQADE EEEEEEDSDI R

Best Arabidopsis Sequence Match ( AT1G01225.1 )
(BLAST)

001: MGLLTNKIER EELKPGDHIY TYRAIFAYSH HGIFVGGSKV VHFRPEHNPM DSSTSSISSS SSEDICSIFP DCGFRQPDSG VVLSCLDCFL KNGSLYCFEY
101: GVSPSVFLTK VRGGTCTTAQ SDTTDSVIHR AMYLLQNGFG NYDIFKNNCE DFALYCKTGL LIMDKLGVGR SGQASSIVGA PLAALLSSPF KLLIPSPIGV
201: ATVTAGMYCM SRYATDIGVR SDVIKVSVED LALNLDVKTI EQGEEEEEDE EEDSDTDYVR

Arabidopsis Description

At1g01225 [Source:UniProtKB/TrEMBL;Acc:Q29PY0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.