CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68934	Soybean	cytosol	89.96	90.31
VIT_15s0046g00120.t01	Wine grape	cytosol	78.38	77.48
Solyc01g096150.2.1	Tomato	cytosol	74.13	75.59
PGSC0003DMT400000664	Potato	cytosol	73.75	75.2
Bra032627.1-P	Field mustard	cytosol	73.36	72.8
CDY51720	Canola	cytosol	69.11	72.47
CDY07154	Canola	cytosol	69.11	71.89
Solyc05g050520.2.1	Tomato	cytosol	70.66	71.76
AT1G01225.1	Thale cress	cytosol	71.81	71.54
Bra037403.1-P	Field mustard	cytosol	67.95	70.68
AT4G00905.1	Thale cress	cytosol	71.43	70.34
CDY37998	Canola	cytosol	72.97	70.26
GSMUA_Achr9P00880_001	Banana	cytosol	66.8	64.07
Zm00001d021248_P002	Maize	cytosol	63.32	61.19
EER99225	Sorghum	cytosol	63.32	61.19
Os09t0526800-01	Rice	cytosol	62.93	60.82
Zm00001d006180_P001	Maize	cytosol	62.16	60.07
TraesCS5D01G321200.1	Wheat	cytosol	61.0	58.96
TraesCS5B01G315900.1	Wheat	cytosol	60.62	58.58
TraesCS5A01G314900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	59.85	57.84
HORVU7Hr1G056880.1	Barley	cytosol	61.0	56.23
TraesCS7A01G270500.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	59.85	54.96
TraesCS7B01G168500.1	Wheat	cytosol, mitochondrion, nucleus, plastid	59.85	54.96
TraesCS7D01G270700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	59.85	54.96
Os08t0546900-01	Rice	cytosol, plasma membrane	52.9	52.29
EES14126	Sorghum	nucleus	60.23	52.0
KRG98048	Soybean	cytosol	47.49	50.62
Zm00001d052741_P001	Maize	cytosol	55.21	50.35
Zm00001d031737_P001	Maize	cytosol	56.37	50.34
KRH72187	Soybean	cytosol	48.65	48.65
KRH32851	Soybean	cytosol	48.65	48.65
KRH17250	Soybean	cytosol	45.56	46.46
KRH30737	Soybean	cytosol	43.24	44.62
KRH30736	Soybean	cytosol, peroxisome, plastid	33.98	44.0
KRG98046	Soybean	cytosol	25.48	44.0
HORVU5Hr1G080870.3	Barley	plastid	52.12	40.18
KRG98047	Soybean	cytosol, golgi, peroxisome	8.11	18.92

Protein Annotations

EMBL:ACUP02012180	EMBL:BT095378	EnsemblPlants:KRG97211	EnsemblPlantsGene:GLYMA_19G257600	EntrezGene:100797242	InterPro:LRAT-like_dom
PANTHER:PTHR13943	PANTHER:PTHR13943:SF32	PFAM:PF04970	ProteinID:KRG97211	ProteinID:KRG97211.1	UniParc:UPI0001B16336
UniProt:C6TCT1	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:50157656..50161423

Molecular Weight (calculated)

28588.0 Da

IEP (calculated)

6.148

GRAVY (calculated)

-0.193

Length

259 amino acids

Sequence
(BLAST)

001: MGLLSNRVER HEIKPGDHIY TYRAVFTYSH HGIFVGGSKV VHFRPERNLK SMTETSSNWD DPTSNPCPTF PDCGFRQPNS GVVLSCLDCF LRNGSLYCFE
101: YEVSPSVFLS RIRGGTCTTA SADPPETVIH RAMYLLQNGF GNYNVFQNNC EDFALYCKTG LLIQDKQGVG RSGQASSVIG APLAAMISSP LKLLMPSPVG
201: VATVTAGMYC MSRYATDIGV RSDVIKVPVE DLAVNLGWIC QEEEEVAEHE NPDRQITTR

Best Arabidopsis Sequence Match ( AT1G01225.1 )
(BLAST)

001: MGLLTNKIER EELKPGDHIY TYRAIFAYSH HGIFVGGSKV VHFRPEHNPM DSSTSSISSS SSEDICSIFP DCGFRQPDSG VVLSCLDCFL KNGSLYCFEY
101: GVSPSVFLTK VRGGTCTTAQ SDTTDSVIHR AMYLLQNGFG NYDIFKNNCE DFALYCKTGL LIMDKLGVGR SGQASSIVGA PLAALLSSPF KLLIPSPIGV
201: ATVTAGMYCM SRYATDIGVR SDVIKVSVED LALNLDVKTI EQGEEEEEDE EEDSDTDYVR

Arabidopsis Description

At1g01225 [Source:UniProtKB/TrEMBL;Acc:Q29PY0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.