Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- plasma membrane 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0069g01180.t01 | Wine grape | cytosol | 72.44 | 75.41 |
| KRG98048 | Soybean | cytosol | 70.47 | 73.66 |
| KRH30736 | Soybean | cytosol, peroxisome, plastid | 53.94 | 68.5 |
| Solyc02g081580.2.1 | Tomato | cytosol | 71.65 | 67.41 |
| GSMUA_Achr7P05990_001 | Banana | cytosol | 67.32 | 67.32 |
| KRG98046 | Soybean | cytosol | 39.37 | 66.67 |
| PGSC0003DMT400045756 | Potato | cytosol | 70.47 | 66.3 |
| KRH30737 | Soybean | cytosol | 63.78 | 64.54 |
| VIT_00s0270g00030.t01 | Wine grape | cytosol | 64.96 | 59.14 |
| KXG36301 | Sorghum | cytosol | 65.35 | 59.07 |
| Os05t0310600-01 | Rice | cytosol | 62.99 | 56.94 |
| Zm00001d021614_P001 | Maize | mitochondrion | 66.14 | 54.72 |
| HORVU5Hr1G043560.3 | Barley | mitochondrion | 64.17 | 54.52 |
| KRH72187 | Soybean | cytosol | 54.33 | 53.28 |
| KRH32851 | Soybean | cytosol | 54.33 | 53.28 |
| TraesCS5D01G142500.1 | Wheat | mitochondrion | 64.57 | 52.4 |
| TraesCS5A01G135900.1 | Wheat | mitochondrion | 63.39 | 46.4 |
| KRH68934 | Soybean | cytosol | 46.46 | 45.74 |
| KRG97211 | Soybean | cytosol | 46.46 | 45.56 |
| KRG98047 | Soybean | cytosol, golgi, peroxisome | 13.78 | 31.53 |
Protein Annotations
| EMBL:ACUP02009070 | EnsemblPlants:KRH17250 | EnsemblPlantsGene:GLYMA_14G208400 | EntrezGene:100784269 | Gene3D:3.90.1720.10 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:LRAT-like_dom | PANTHER:PTHR13943 | PANTHER:PTHR13943:SF32 | PFAM:PF04970 |
| ProteinID:KRH17250 | ProteinID:KRH17250.1 | SEG:seg | UniParc:UPI000233B6EF | UniProt:I1MBP6 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr14:-:47403978..47407155
Molecular Weight (calculated)
27421.6 Da
IEP (calculated)
5.574
GRAVY (calculated)
0.044
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVLSNMIDR EQLKPGDHIY SWRQAYIYAH HGIYVGDGMV IHFTRGAGQE IGTGTVLDNL LFSSSPSHSS DTPCPRCGDQ TRTDGVISSC LDCFLYGGNL
101: YIFEYGVSPA FFLAKARGGT CTLAPSDPTE DVLHRSSFLL ENGFGVYNIF KNNCEDFAIY CKTGLLVSTS VSVGRSGQAA SYLAAASTLV STPLRFMTTS
201: FSGLALVGVS FYCVGRLMSD IGVRRDVSKV PVERLIASPG LDVPENTTEM AKED
101: YIFEYGVSPA FFLAKARGGT CTLAPSDPTE DVLHRSSFLL ENGFGVYNIF KNNCEDFAIY CKTGLLVSTS VSVGRSGQAA SYLAAASTLV STPLRFMTTS
201: FSGLALVGVS FYCVGRLMSD IGVRRDVSKV PVERLIASPG LDVPENTTEM AKED
001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT
Arabidopsis Description
At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.