Factsheet for Solyc02g081580.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045756	Potato	cytosol	94.44	94.44
VIT_04s0069g01180.t01	Wine grape	cytosol	65.19	72.13
KRH17250	Soybean	cytosol	67.41	71.65
GSMUA_Achr7P05990_001	Banana	cytosol	62.59	66.54
AT3G02700.1	Thale cress	cytosol	59.63	63.89
Bra021419.1-P	Field mustard	cytosol	58.52	59.18
VIT_00s0270g00030.t01	Wine grape	cytosol	60.37	58.42
KXG36301	Sorghum	cytosol	60.37	58.01
CDY55574	Canola	cytosol	53.7	57.31
Os05t0310600-01	Rice	cytosol	59.26	56.94
CDY67201	Canola	cytosol	51.11	56.79
CDX69451	Canola	cytosol	53.7	56.2
CDY53737	Canola	cytosol	58.52	56.03
CDX78682	Canola	cytosol	48.89	55.46
CDX85508	Canola	cytosol	42.59	55.02
CDX70686	Canola	cytosol	48.52	54.58
CDY38122	Canola	cytosol	52.96	54.58
CDY38121	Canola	cytosol	45.93	54.39
HORVU5Hr1G043560.3	Barley	mitochondrion	60.0	54.18
AT5G16330.1	Thale cress	cytosol	48.15	53.72
Solyc01g007110.2.1	Tomato	cytosol	51.11	53.49
Zm00001d021614_P001	Maize	mitochondrion	60.37	53.09
Bra008622.1-P	Field mustard	cytosol	47.78	52.02
TraesCS5D01G142500.1	Wheat	mitochondrion	59.63	51.44
CDY55575	Canola	cytosol	47.78	50.79
Bra023561.1-P	Field mustard	cytosol	48.89	50.57
Bra008623.1-P	Field mustard	cytosol	53.7	49.83
CDY72287	Canola	cytosol	47.78	49.43
Bra023560.1-P	Field mustard	cytosol	52.96	49.31
AT5G16360.1	Thale cress	cytosol	51.48	49.12
Solyc01g096150.2.1	Tomato	cytosol	45.56	48.43
TraesCS5A01G135900.1	Wheat	mitochondrion	59.26	46.11
Solyc05g050520.2.1	Tomato	cytosol	43.33	45.88
CDX70687	Canola	plastid	44.81	45.83
Solyc12g055850.1.1	Tomato	cytosol	47.78	45.1
CDX78683	Canola	cytosol	50.0	44.85

Protein Annotations

EnsemblPlants:Solyc02g081580.2.1	EnsemblPlantsGene:Solyc02g081580.2	Gene3D:3.90.1720.10	InterPro:LRAT-like_dom	PANTHER:PTHR13943	PANTHER:PTHR13943:SF32
PFAM:PF04970	SEG:seg	UniParc:UPI000276795C	UniProt:K4BA28	MapMan:35.2	:

Description

No Description!

Coordinates

chr2:-:45474192..45477069

Molecular Weight (calculated)

29126.9 Da

IEP (calculated)

7.673

GRAVY (calculated)

0.054

Length

270 amino acids

Sequence
(BLAST)

001: MSESSRWTMP EMAGILSNKI PQDELKPGDH IYSWRNAYLY AHHGIYVGDG MVIHFTRAAG QEIGTGTVLD RFIFSSSPSH PSGSPCPRCG DQSRTEGVIS
101: SCLECFLCGG ELYLFKYGVS PGVFIAKTRG GTCTIAPSDP PEHVLHRAKF LLQNGFGVYN IFKNNCEDFA IYCKTGLLVF TNVSVGRSGQ ATSFLAATTA
201: IVSSPLRFLT TGVSGLAAVG FGVYCVSRYV SDIGVRRDVM KIPVERLILC PGPLESEAAT ITDISKDKGS

Best Arabidopsis Sequence Match ( AT3G02700.1 )
(BLAST)

001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT

Arabidopsis Description

At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.