Factsheet for Os05t0310600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
cytosol 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36301	Sorghum	cytosol	73.67	73.67
HORVU5Hr1G043560.3	Barley	mitochondrion	73.31	68.9
Zm00001d021614_P001	Maize	mitochondrion	75.09	68.73
VIT_04s0069g01180.t01	Wine grape	cytosol	57.65	66.39
GSMUA_Achr7P05990_001	Banana	cytosol	59.79	66.14
TraesCS5D01G142500.1	Wheat	mitochondrion	72.6	65.18
KRG98048	Soybean	cytosol	55.87	64.61
KRH17250	Soybean	cytosol	56.94	62.99
TraesCS5A01G135900.1	Wheat	mitochondrion	73.31	59.37
Solyc02g081580.2.1	Tomato	cytosol	56.94	59.26
PGSC0003DMT400045756	Potato	cytosol	55.87	58.15
AT3G02700.1	Thale cress	cytosol	51.6	57.54
Bra021419.1-P	Field mustard	cytosol	52.67	55.43
KRG98046	Soybean	cytosol	29.54	55.33
KRH30737	Soybean	cytosol	49.11	54.98
KRH30736	Soybean	cytosol, peroxisome, plastid	38.43	54.0
VIT_00s0270g00030.t01	Wine grape	cytosol	53.38	53.76
CDX70686	Canola	cytosol	45.91	53.75
CDX78682	Canola	cytosol	45.2	53.36
CDY53737	Canola	cytosol	53.38	53.19
CDX85508	Canola	cytosol	38.43	51.67
CDY67201	Canola	cytosol	44.48	51.44
CDY55574	Canola	cytosol	45.91	50.99
AT5G16330.1	Thale cress	cytosol	43.42	50.41
Bra008622.1-P	Field mustard	cytosol	44.48	50.4
CDX69451	Canola	cytosol	46.26	50.39
CDY38122	Canola	cytosol	45.55	48.85
CDY55575	Canola	cytosol	44.13	48.82
CDY38121	Canola	cytosol	39.5	48.68
Bra023561.1-P	Field mustard	cytosol	43.42	46.74
Bra023560.1-P	Field mustard	cytosol	48.04	46.55
CDY72287	Canola	cytosol	42.35	45.59
AT5G16360.1	Thale cress	cytosol	45.55	45.23
Bra008623.1-P	Field mustard	cytosol	45.2	43.64
Os09t0526800-01	Rice	cytosol	40.21	42.16
CDX78683	Canola	cytosol	44.84	41.86
CDX70687	Canola	plastid	39.15	41.67
Os08t0546900-01	Rice	cytosol, plasma membrane	38.79	41.6
KRG98047	Soybean	cytosol, golgi, peroxisome	9.61	24.32

Protein Annotations

EMBL:AK240681	EnsemblPlants:Os05t0310600-01	EnsemblPlantsGene:Os05g0310600	EntrezGene:4338374	InterPro:LRAT-like_dom	PANTHER:PTHR13943
PANTHER:PTHR13943:SF32	PFAM:PF04970	ProteinID:BAF17072.1	ProteinID:BAS93282.1	ProteinID:EEE63191.1	RefSeq:XP_015639552.1
UniParc:UPI0000E12431	UniProt:Q0DJA1	MapMan:35.2	:	:	:

Description

NC domain containing protein. (Os05t0310600-01)

Coordinates

chr5:-:14165755..14168182

Molecular Weight (calculated)

30149.8 Da

IEP (calculated)

5.710

GRAVY (calculated)

0.098

Length

281 amino acids

Sequence
(BLAST)

001: MVGVLSNRVD RLDLAAGDHI YSWRTAYLYA HHGIYIGDAM VIHFTRATGH EIGTGTFLDM FLFSSSPATE EGPPCEKCGH LIKQQGVIMS CLDCFLDGGN
101: PYLFDYAVSP AFFLVKARGG TCTLAASDPA DIVIHRAQHL LNSGFGTYSL FKNNCEDFAI YCKTGLLVET AFSVGRSGQL ASLTAAFSAV ASSPLRFLTT
201: SAGGLVVVTS GMYCVGRYVS DIGVRRDVVK VPVERLVEHW PPRDVAVAPP QESHQECQGN DVAPQECHGD GDGGCVSESL S

Best Arabidopsis Sequence Match ( AT3G02700.1 )
(BLAST)

001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT

Arabidopsis Description

At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.