CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30736	Soybean	cytosol, peroxisome, plastid	62.96	76.5
KRH17250	Soybean	cytosol	73.66	70.47
KRG98046	Soybean	cytosol	41.98	68.0
KRH30737	Soybean	cytosol	69.14	66.93
GSMUA_Achr7P05990_001	Banana	cytosol	68.31	65.35
AT3G02700.1	Thale cress	cytosol	67.49	65.08
Bra021419.1-P	Field mustard	cytosol	68.72	62.55
KXG36301	Sorghum	cytosol	68.72	59.43
CDY53737	Canola	cytosol	68.72	59.22
CDX78682	Canola	cytosol	55.56	56.72
Os05t0310600-01	Rice	cytosol	64.61	55.87
CDX70686	Canola	cytosol	54.73	55.42
CDY67201	Canola	cytosol	55.14	55.14
CDY55574	Canola	cytosol	56.79	54.55
Zm00001d021614_P001	Maize	mitochondrion	68.72	54.4
CDY38122	Canola	cytosol	58.44	54.2
CDX85508	Canola	cytosol	46.09	53.59
CDY38121	Canola	cytosol	50.21	53.51
CDX69451	Canola	cytosol	56.79	53.49
KRH32851	Soybean	cytosol	56.38	52.9
KRH72187	Soybean	cytosol	56.38	52.9
HORVU5Hr1G043560.3	Barley	mitochondrion	64.61	52.51
AT5G16330.1	Thale cress	cytosol	52.26	52.48
Bra008622.1-P	Field mustard	cytosol	53.5	52.42
CDY55575	Canola	cytosol	53.5	51.18
TraesCS5D01G142500.1	Wheat	mitochondrion	64.61	50.16
Bra023560.1-P	Field mustard	cytosol	59.26	49.66
AT5G16360.1	Thale cress	cytosol	57.2	49.12
Bra023561.1-P	Field mustard	cytosol	51.85	48.28
Bra008623.1-P	Field mustard	cytosol	57.61	48.11
KRG97211	Soybean	cytosol	50.62	47.49
CDY72287	Canola	cytosol	50.62	47.13
CDX70687	Canola	plastid	51.03	46.97
KRH68934	Soybean	cytosol	49.79	46.9
CDX78683	Canola	cytosol	57.2	46.18
TraesCS5A01G135900.1	Wheat	mitochondrion	64.61	45.24
KRG98047	Soybean	cytosol, golgi, peroxisome	15.23	33.33

Protein Annotations

KEGG:00920+1.8.1.2	EntrezGene:100781683	Gene3D:3.90.1720.10	MapMan:35.2	EMBL:ACUP02010840	EnsemblPlantsGene:GLYMA_18G047200
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0020037	GO:GO:0051536	GO:GO:0055114	UniProt:I1MZK9	EnsemblPlants:KRG98048	ProteinID:KRG98048
ProteinID:KRG98048.1	InterPro:LRAT-like_dom	InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS	PFAM:PF04970	ScanProsite:PS00365	PANTHER:PTHR13943
PANTHER:PTHR13943:SF32	MetaCyc:PWY-6683	UniParc:UPI000233E714	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr18:+:4126016..4127430

Molecular Weight (calculated)

26345.6 Da

IEP (calculated)

7.335

GRAVY (calculated)

0.096

Length

243 amino acids

Sequence
(BLAST)

001: MGVLSNKIDR EQLKPGDHIY SWRQAYIYAH HGIYVGEGMV IHFTRRAGQE TRSGTILDRL LISSPPLRAT FDTPCPRCGD QARSDGVICS CLDCFLSGGD
101: LYLFEYSVSP AFFLAKARGG TCTTAFSDPT DEVLHRALFL LENGFGGYHV FKNNCEDFAI YCKTGLLVVT NISVGRSGQA ASCFAAASAV VSSPLRFMTA
201: SFGGLALVGC GMYCVSRYVS DIGVRGDVAK VPVEKISEMA KEQ

Best Arabidopsis Sequence Match ( AT3G02700.1 )
(BLAST)

001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT

Arabidopsis Description

At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.