Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021419.1-P | Field mustard | cytosol | 87.7 | 82.77 |
| CDY53737 | Canola | cytosol | 87.3 | 78.01 |
| VIT_04s0069g01180.t01 | Wine grape | cytosol | 66.27 | 68.44 |
| KRG98048 | Soybean | cytosol | 65.08 | 67.49 |
| Solyc02g081580.2.1 | Tomato | cytosol | 63.89 | 59.63 |
| KRH30736 | Soybean | cytosol, peroxisome, plastid | 47.22 | 59.5 |
| AT5G16330.1 | Thale cress | cytosol | 56.35 | 58.68 |
| PGSC0003DMT400045756 | Potato | cytosol | 62.3 | 58.15 |
| GSMUA_Achr7P05990_001 | Banana | cytosol | 58.33 | 57.87 |
| KRH30737 | Soybean | cytosol | 57.14 | 57.37 |
| KRG98046 | Soybean | cytosol | 33.73 | 56.67 |
| AT5G16360.1 | Thale cress | cytosol | 61.9 | 55.12 |
| VIT_00s0270g00030.t01 | Wine grape | cytosol | 60.32 | 54.48 |
| KXG36301 | Sorghum | cytosol | 59.13 | 53.02 |
| Os05t0310600-01 | Rice | cytosol | 57.54 | 51.6 |
| AT5G06370.1 | Thale cress | cytosol | 52.78 | 51.35 |
| Zm00001d021614_P001 | Maize | mitochondrion | 59.13 | 48.53 |
| HORVU5Hr1G043560.3 | Barley | mitochondrion | 56.35 | 47.49 |
| AT1G01225.1 | Thale cress | cytosol | 48.81 | 47.31 |
| AT4G00905.1 | Thale cress | cytosol | 47.22 | 45.25 |
| TraesCS5D01G142500.1 | Wheat | mitochondrion | 55.95 | 45.05 |
| TraesCS5A01G135900.1 | Wheat | mitochondrion | 56.35 | 40.92 |
| KRG98047 | Soybean | cytosol, golgi, peroxisome | 11.9 | 27.03 |
Protein Annotations
| MapMan:35.2 | EntrezGene:820843 | ProteinID:AAF32477.1 | ProteinID:AEE73849.1 | EMBL:AK117161 | ArrayExpress:AT3G02700 |
| EnsemblPlantsGene:AT3G02700 | RefSeq:AT3G02700 | TAIR:AT3G02700 | RefSeq:AT3G02700-TAIR-G | EnsemblPlants:AT3G02700.1 | TAIR:AT3G02700.1 |
| Unigene:At.75116 | EMBL:BT006225 | InterPro:LRAT-like_dom | RefSeq:NP_566181.1 | PFAM:PF04970 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR13943 | PANTHER:PTHR13943:SF41 | UniProt:Q9M872 |
| UniParc:UPI00000AC72E | SEG:seg | : | : | : | : |
Description
At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
Coordinates
chr3:-:581541..582949
Molecular Weight (calculated)
27066.9 Da
IEP (calculated)
5.042
GRAVY (calculated)
-0.016
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.