Factsheet for HORVU5Hr1G043560.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G142500.1	Wheat	mitochondrion	81.61	77.96
Os05t0310600-01	Rice	cytosol	68.9	73.31
KXG36301	Sorghum	cytosol	68.23	72.6
TraesCS5A01G135900.1	Wheat	mitochondrion	81.61	70.32
Zm00001d021614_P001	Maize	mitochondrion	68.56	66.78
VIT_04s0069g01180.t01	Wine grape	cytosol	53.18	65.16
GSMUA_Achr7P05990_001	Banana	cytosol	55.18	64.96
KRG98048	Soybean	cytosol	52.51	64.61
KRH17250	Soybean	cytosol	54.52	64.17
Solyc02g081580.2.1	Tomato	cytosol	54.18	60.0
PGSC0003DMT400045756	Potato	cytosol	52.84	58.52
AT3G02700.1	Thale cress	cytosol	47.49	56.35
KRH30737	Soybean	cytosol	46.49	55.38
KRH30736	Soybean	cytosol, peroxisome, plastid	36.79	55.0
Bra021419.1-P	Field mustard	cytosol	48.83	54.68
KRG98046	Soybean	cytosol	27.42	54.67
CDY55574	Canola	cytosol	45.48	53.75
CDX85508	Canola	cytosol	37.46	53.59
CDY53737	Canola	cytosol	50.5	53.55
VIT_00s0270g00030.t01	Wine grape	cytosol	49.83	53.41
CDX69451	Canola	cytosol	45.82	53.1
CDY67201	Canola	cytosol	43.14	53.09
CDX78682	Canola	cytosol	41.81	52.52
CDX70686	Canola	cytosol	42.14	52.5
AT5G16330.1	Thale cress	cytosol	41.81	51.65
Bra008622.1-P	Field mustard	cytosol	42.47	51.21
CDY38122	Canola	cytosol	44.48	50.76
HORVU1Hr1G074130.1	Barley	cytosol	46.15	50.18
CDY55575	Canola	cytosol	42.47	50.0
CDY38121	Canola	cytosol	37.79	49.56
Bra023561.1-P	Field mustard	cytosol	41.81	47.89
Bra023560.1-P	Field mustard	cytosol	46.15	47.59
CDY72287	Canola	cytosol	41.14	47.13
HORVU7Hr1G056880.1	Barley	cytosol	43.81	46.62
AT5G16360.1	Thale cress	cytosol	43.48	45.94
Bra008623.1-P	Field mustard	cytosol	44.48	45.7
CDX70687	Canola	plastid	37.79	42.8
CDX78683	Canola	cytosol	42.81	42.52
HORVU5Hr1G080870.3	Barley	plastid	35.12	31.25
KRG98047	Soybean	cytosol, golgi, peroxisome	9.36	25.23

Protein Annotations

EnsemblPlants:HORVU5Hr1G043560.3	EnsemblPlantsGene:HORVU5Hr1G043560	InterPro:LRAT-like_dom	PANTHER:PTHR13943	PANTHER:PTHR13943:SF32	PFAM:PF04970
SEG:seg	UniParc:UPI00029685BF	UniProt:M0WN73	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr5H:-:336592087..336595136

Molecular Weight (calculated)

31615.9 Da

IEP (calculated)

6.980

GRAVY (calculated)

0.077

Length

299 amino acids

Sequence
(BLAST)

001: MVGVLSNRVG REALAAGDHI YSWRTAYIYA HHGIYAGDGM VIHFTRAAGH EIGTGTFLDK FLFSSSPTTA DGPPCEKCGH LIKPQGVIMS CLDCFLDGGS
101: LYLFDYAVSP PFFLAKARGG TCTMAPSDAA QLVVHRAKHL LNNGFGMYSL FKNNCEDFAI YCKTELLVET AYSVGRSGQL ASLTAAFSAV ASSPLRFLTT
201: SASGLAIVTS GMYCVGRYVS DMGVRRDVIK VPVERLVEHW VNNVTPALPQ GATQVETATP TPTPTPGGSP ELPGEGELAK MATPGGSLEL PGEGGLAKK

Best Arabidopsis Sequence Match ( AT3G02700.1 )
(BLAST)

001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT

Arabidopsis Description

At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.