Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G314900.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 67.26 | 84.33 |
| TraesCS5D01G321200.1 | Wheat | cytosol | 66.37 | 83.21 |
| TraesCS5B01G315900.1 | Wheat | cytosol | 66.07 | 82.84 |
| Zm00001d021248_P002 | Maize | cytosol | 58.04 | 72.76 |
| EER99225 | Sorghum | cytosol | 58.04 | 72.76 |
| Os09t0526800-01 | Rice | cytosol | 57.74 | 72.39 |
| Zm00001d006180_P001 | Maize | cytosol | 57.44 | 72.01 |
| GSMUA_Achr9P00880_001 | Banana | cytosol | 49.4 | 61.48 |
| HORVU7Hr1G056880.1 | Barley | cytosol | 48.51 | 58.01 |
| Solyc01g096150.2.1 | Tomato | cytosol | 42.56 | 56.3 |
| PGSC0003DMT400000664 | Potato | cytosol | 42.26 | 55.91 |
| VIT_15s0046g00120.t01 | Wine grape | cytosol | 42.86 | 54.96 |
| Bra032627.1-P | Field mustard | cytosol | 42.26 | 54.41 |
| AT1G01225.1 | Thale cress | cytosol | 41.96 | 54.23 |
| Solyc05g050520.2.1 | Tomato | cytosol | 40.77 | 53.73 |
| KRH68934 | Soybean | cytosol | 40.48 | 52.71 |
| CDY07154 | Canola | cytosol | 38.99 | 52.61 |
| CDY37998 | Canola | cytosol | 41.96 | 52.42 |
| CDY51720 | Canola | cytosol | 38.39 | 52.23 |
| Bra037403.1-P | Field mustard | cytosol | 38.69 | 52.21 |
| KRG97211 | Soybean | cytosol | 40.18 | 52.12 |
| AT4G00905.1 | Thale cress | cytosol | 39.58 | 50.57 |
| PGSC0003DMT400012897 | Potato | mitochondrion, nucleus | 39.88 | 47.86 |
| Solyc12g055850.1.1 | Tomato | cytosol | 40.18 | 47.2 |
| HORVU1Hr1G074130.1 | Barley | cytosol | 33.63 | 41.09 |
| HORVU5Hr1G043560.3 | Barley | mitochondrion | 31.25 | 35.12 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G080870.3 | EnsemblPlantsGene:HORVU5Hr1G080870 | InterPro:LRAT-like_dom | PANTHER:PTHR13943 | PANTHER:PTHR13943:SF43 | PFAM:PF04970 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000B47862F | UniProt:A0A287RZQ1 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr5H:-:562277183..562279749
Molecular Weight (calculated)
36032.9 Da
IEP (calculated)
8.999
GRAVY (calculated)
-0.301
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: PAPASPPRIY LPSALPPIIT SPRPPPPPPL FYSTYSLRTS LHSHGREGEP RRRTDGAEDS AGGRRRRRWG CCRTGWSGRR SGPATTSTPG GPSTPTPTTG
101: IYVGGSKVVH FTRKKEVESS DSSNSISGLI SRASSECPTF PDCGFQLDDS GVVLTCLDCF LGNGSLYCFE YGVPPAIFLA KFRGGTCTIA QSDPSEAVVR
201: RAMHLLQNGF GNYDIFEKNC EDFALYCKTG LVPVDEPGIG VSGQASSAIG VPLAALLSTP FKIFAAGPLG MATVTAGMYC AGRYITDIGV RKDVAKVEVE
301: NLPSHLGFRR VEDAESVNRS SDKVTKLLPL KRKRER
101: IYVGGSKVVH FTRKKEVESS DSSNSISGLI SRASSECPTF PDCGFQLDDS GVVLTCLDCF LGNGSLYCFE YGVPPAIFLA KFRGGTCTIA QSDPSEAVVR
201: RAMHLLQNGF GNYDIFEKNC EDFALYCKTG LVPVDEPGIG VSGQASSAIG VPLAALLSTP FKIFAAGPLG MATVTAGMYC AGRYITDIGV RKDVAKVEVE
301: NLPSHLGFRR VEDAESVNRS SDKVTKLLPL KRKRER
001: MGLLTNKIER EELKPGDHIY TYRAIFAYSH HGIFVGGSKV VHFRPEHNPM DSSTSSISSS SSEDICSIFP DCGFRQPDSG VVLSCLDCFL KNGSLYCFEY
101: GVSPSVFLTK VRGGTCTTAQ SDTTDSVIHR AMYLLQNGFG NYDIFKNNCE DFALYCKTGL LIMDKLGVGR SGQASSIVGA PLAALLSSPF KLLIPSPIGV
201: ATVTAGMYCM SRYATDIGVR SDVIKVSVED LALNLDVKTI EQGEEEEEDE EEDSDTDYVR
101: GVSPSVFLTK VRGGTCTTAQ SDTTDSVIHR AMYLLQNGFG NYDIFKNNCE DFALYCKTGL LIMDKLGVGR SGQASSIVGA PLAALLSSPF KLLIPSPIGV
201: ATVTAGMYCM SRYATDIGVR SDVIKVSVED LALNLDVKTI EQGEEEEEDE EEDSDTDYVR
Arabidopsis Description
At1g01225 [Source:UniProtKB/TrEMBL;Acc:Q29PY0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.