Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037403.1-P | Field mustard | cytosol | 96.76 | 95.98 |
| CDY07154 | Canola | cytosol | 92.31 | 91.57 |
| AT4G00905.1 | Thale cress | cytosol | 83.81 | 78.71 |
| PGSC0003DMT400000664 | Potato | cytosol | 73.28 | 71.26 |
| Solyc01g096150.2.1 | Tomato | cytosol | 72.87 | 70.87 |
| KRG97211 | Soybean | cytosol | 72.47 | 69.11 |
| KRH68934 | Soybean | cytosol | 72.06 | 68.99 |
| CDY37998 | Canola | cytosol | 74.49 | 68.4 |
| VIT_15s0046g00120.t01 | Wine grape | cytosol | 71.66 | 67.56 |
| Solyc05g050520.2.1 | Tomato | cytosol | 69.23 | 67.06 |
| GSMUA_Achr9P00880_001 | Banana | cytosol | 63.16 | 57.78 |
| Os09t0526800-01 | Rice | cytosol | 61.94 | 57.09 |
| Zm00001d021248_P002 | Maize | cytosol | 61.54 | 56.72 |
| EER99225 | Sorghum | cytosol | 61.54 | 56.72 |
| Zm00001d006180_P001 | Maize | cytosol | 60.73 | 55.97 |
| TraesCS5D01G321200.1 | Wheat | cytosol | 60.32 | 55.6 |
| TraesCS5B01G315900.1 | Wheat | cytosol | 60.32 | 55.6 |
| TraesCS5A01G314900.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 59.92 | 55.22 |
| HORVU7Hr1G056880.1 | Barley | cytosol | 60.32 | 53.02 |
| TraesCS7B01G168500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 60.32 | 52.84 |
| TraesCS7D01G270700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 59.92 | 52.48 |
| TraesCS7A01G270500.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 59.92 | 52.48 |
| Os08t0546900-01 | Rice | cytosol, plasma membrane | 52.63 | 49.62 |
| EES14126 | Sorghum | nucleus | 59.51 | 49.0 |
| Zm00001d052741_P001 | Maize | cytosol | 55.47 | 48.24 |
| Zm00001d031737_P001 | Maize | cytosol | 55.47 | 47.24 |
| CDY55757 | Canola | cytosol | 49.39 | 46.92 |
| CDX81002 | Canola | cytosol | 48.99 | 46.54 |
| CDX78682 | Canola | cytosol | 44.13 | 45.8 |
| CDY67201 | Canola | cytosol | 44.53 | 45.27 |
| CDY55574 | Canola | cytosol | 46.15 | 45.06 |
| CDY38122 | Canola | cytosol | 47.77 | 45.04 |
| CDX70686 | Canola | cytosol | 43.32 | 44.58 |
| CDX69451 | Canola | cytosol | 46.15 | 44.19 |
| CDX85508 | Canola | cytosol | 37.25 | 44.02 |
| CDY38121 | Canola | cytosol | 39.68 | 42.98 |
| CDY53737 | Canola | cytosol | 46.56 | 40.78 |
| CDY55575 | Canola | cytosol | 41.3 | 40.16 |
| CDY72287 | Canola | cytosol | 42.11 | 39.85 |
| HORVU5Hr1G080870.3 | Barley | plastid | 52.23 | 38.39 |
| CDX78683 | Canola | cytosol | 44.94 | 36.88 |
| CDX70687 | Canola | plastid | 39.27 | 36.74 |
Protein Annotations
| EnsemblPlants:CDY51720 | EnsemblPlantsGene:GSBRNA2T00004071001 | InterPro:LRAT-like_dom | PANTHER:PTHR13943 | PANTHER:PTHR13943:SF73 | PFAM:PF04970 |
| ProteinID:CDY51720 | ProteinID:CDY51720.1 | SEG:seg | UniParc:UPI0004EE93E6 | UniProt:A0A078IKY6 | MapMan:35.2 |
Description
BnaA09g52070DBnaA09g52070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKY6]
Coordinates
chrLK033021:+:61050..62162
Molecular Weight (calculated)
26655.0 Da
IEP (calculated)
8.471
GRAVY (calculated)
-0.022
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLITNKVDR DELKPGDHIY TYRAVFAYSH HGVFVGGCKV VHFKPEQSLK ASSSSSSSTA SSEVNNDSSC PTYPDCGFKQ PNSGVLLSCL DCFLKNGTLY
101: RFTYGVSSSM FLTRLRGGTC TTAPSDPFQT VVHRAMHLLQ NGFGNYDVFQ NNCEDFALYC KTGLLILDKN GVGRSGQASS VLGAPLAALL SSPLTLLIPN
201: PVGVATVTAG MYCMSRYATD IGVRTDVIKV PVEDLALNLG IKTLKKR
101: RFTYGVSSSM FLTRLRGGTC TTAPSDPFQT VVHRAMHLLQ NGFGNYDVFQ NNCEDFALYC KTGLLILDKN GVGRSGQASS VLGAPLAALL SSPLTLLIPN
201: PVGVATVTAG MYCMSRYATD IGVRTDVIKV PVEDLALNLG IKTLKKR
001: MGVLTNKVER DELKPGDHIY TYRAVFAYSH HGVFVGGCKV VHFKPEHSLI SPTLASSSSS SSSSVSEVND SSEAPCPTYP DCGYKRPKSG VVLSCLDCFL
101: KKGSLYRFDY GVSSSIFLTR FRGGTCTTAP SDPLQTVIHR AMHLLQNGFG NYNVFQNNCE DFALYCKTGL LILDKNGVGR SGQASSIIGA PLAALLSSPL
201: TLLIPNPVGV ATVTAGMYCM SRYATDIGVR NDVIKVPVED LALNLGLKPL KRKRKACDTS ISR
101: KKGSLYRFDY GVSSSIFLTR FRGGTCTTAP SDPLQTVIHR AMHLLQNGFG NYNVFQNNCE DFALYCKTGL LILDKNGVGR SGQASSIIGA PLAALLSSPL
201: TLLIPNPVGV ATVTAGMYCM SRYATDIGVR NDVIKVPVED LALNLGLKPL KRKRKACDTS ISR
Arabidopsis Description
NC domain-containing protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q3EAE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.