Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d052741_P001 | Maize | cytosol | 66.55 | 67.96 |
| EES14126 | Sorghum | nucleus | 67.24 | 65.0 |
| TraesCS7B01G168500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 61.03 | 62.77 |
| HORVU7Hr1G056880.1 | Barley | cytosol | 60.69 | 62.63 |
| TraesCS7A01G270500.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 60.69 | 62.41 |
| Zm00001d006180_P001 | Maize | cytosol | 57.59 | 62.31 |
| TraesCS7D01G270700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 60.34 | 62.06 |
| Os08t0546900-01 | Rice | cytosol, plasma membrane | 55.52 | 61.45 |
| Zm00001d021248_P002 | Maize | cytosol | 55.86 | 60.45 |
| GSMUA_Achr9P00880_001 | Banana | cytosol | 54.14 | 58.15 |
| PGSC0003DMT400000664 | Potato | cytosol | 50.34 | 57.48 |
| Solyc01g096150.2.1 | Tomato | cytosol | 50.34 | 57.48 |
| VIT_15s0046g00120.t01 | Wine grape | cytosol | 51.03 | 56.49 |
| KRG97211 | Soybean | cytosol | 50.34 | 56.37 |
| Solyc05g050520.2.1 | Tomato | cytosol | 49.31 | 56.08 |
| CDY51720 | Canola | cytosol | 47.24 | 55.47 |
| KRH68934 | Soybean | cytosol | 48.97 | 55.04 |
| Bra037403.1-P | Field mustard | cytosol | 46.9 | 54.62 |
| AT1G01225.1 | Thale cress | cytosol | 48.62 | 54.23 |
| CDY07154 | Canola | cytosol | 46.55 | 54.22 |
| Bra032627.1-P | Field mustard | cytosol | 47.59 | 52.87 |
| AT4G00905.1 | Thale cress | cytosol | 46.9 | 51.71 |
| CDY37998 | Canola | cytosol | 47.59 | 51.3 |
| PGSC0003DMT400012897 | Potato | mitochondrion, nucleus | 48.28 | 50.0 |
| Solyc12g055850.1.1 | Tomato | cytosol | 45.86 | 46.5 |
| Zm00001d021614_P001 | Maize | mitochondrion | 41.72 | 39.41 |
| Zm00001d046887_P001 | Maize | cytosol | 13.1 | 17.67 |
Protein Annotations
| EnsemblPlants:Zm00001d031737_P001 | EnsemblPlants:Zm00001d031737_T001 | EnsemblPlantsGene:Zm00001d031737 | EntrezGene:103643124 | InterPro:LRAT-like_dom | PANTHER:PTHR13943 |
| PANTHER:PTHR13943:SF43 | PFAM:PF04970 | ProteinID:ONM03609.1 | SEG:seg | UniParc:UPI0002213D3F | UniProt:A0A1D6KL42 |
| MapMan:35.2 | : | : | : | : | : |
Description
NC domain-containing protein-related
Coordinates
chr1:-:200260170..200262141
Molecular Weight (calculated)
30277.3 Da
IEP (calculated)
8.422
GRAVY (calculated)
0.051
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLLSQRVEL SDMKPGDHIY TWRAGYTYSH HGIYVGGSKV VHFTRKKEAG NAGLDSAVVA ASSSLLLSQQ GPDGAACPAS LPDCGFQLPD SGVVLTCLDC
101: FLRGGAAHRF EYGAAAAAFL ARLRGGTCTT ARADAGAAAV RRAMHLLRHG CFGDYDVFGN NCEDFALYCR TALLPAAATG IGRSGQAASA VGVPLAALLS
201: TPLNLLAAAG PLGVAAVTAG VYCAGRYVTD IGVRKDVVKV EAEDLAAHLG CCRRRAEEQE EAAALNNKKE QPAKAKQSLL PLKRKREVCV
101: FLRGGAAHRF EYGAAAAAFL ARLRGGTCTT ARADAGAAAV RRAMHLLRHG CFGDYDVFGN NCEDFALYCR TALLPAAATG IGRSGQAASA VGVPLAALLS
201: TPLNLLAAAG PLGVAAVTAG VYCAGRYVTD IGVRKDVVKV EAEDLAAHLG CCRRRAEEQE EAAALNNKKE QPAKAKQSLL PLKRKREVCV
001: MGVLTNKVER DELKPGDHIY TYRAVFAYSH HGVFVGGCKV VHFKPEHSLI SPTLASSSSS SSSSVSEVND SSEAPCPTYP DCGYKRPKSG VVLSCLDCFL
101: KKGSLYRFDY GVSSSIFLTR FRGGTCTTAP SDPLQTVIHR AMHLLQNGFG NYNVFQNNCE DFALYCKTGL LILDKNGVGR SGQASSIIGA PLAALLSSPL
201: TLLIPNPVGV ATVTAGMYCM SRYATDIGVR NDVIKVPVED LALNLGLKPL KRKRKACDTS ISR
101: KKGSLYRFDY GVSSSIFLTR FRGGTCTTAP SDPLQTVIHR AMHLLQNGFG NYNVFQNNCE DFALYCKTGL LILDKNGVGR SGQASSIIGA PLAALLSSPL
201: TLLIPNPVGV ATVTAGMYCM SRYATDIGVR NDVIKVPVED LALNLGLKPL KRKRKACDTS ISR
Arabidopsis Description
NC domain-containing protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q3EAE0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.