Factsheet for AT4G00905.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07154	Canola	cytosol	79.47	83.94
CDY51720	Canola	cytosol	78.71	83.81
Bra037403.1-P	Field mustard	cytosol	78.71	83.13
KRG97211	Soybean	cytosol	70.34	71.43
KRH68934	Soybean	cytosol	69.58	70.93
AT1G01225.1	Thale cress	cytosol	69.58	70.38
PGSC0003DMT400000664	Potato	cytosol	67.3	69.69
Solyc01g096150.2.1	Tomato	cytosol	66.92	69.29
Solyc05g050520.2.1	Tomato	cytosol	66.54	68.63
VIT_15s0046g00120.t01	Wine grape	cytosol	68.06	68.32
GSMUA_Achr9P00880_001	Banana	cytosol	59.7	58.15
EER99225	Sorghum	cytosol	58.17	57.09
TraesCS5D01G321200.1	Wheat	cytosol	57.79	56.72
Os09t0526800-01	Rice	cytosol	57.79	56.72
TraesCS5B01G315900.1	Wheat	cytosol	57.41	56.34
TraesCS5A01G314900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	57.41	56.34
Zm00001d006180_P001	Maize	cytosol	57.41	56.34
Zm00001d021248_P002	Maize	cytosol	57.41	56.34
TraesCS7B01G168500.1	Wheat	cytosol, mitochondrion, nucleus, plastid	55.13	51.42
HORVU7Hr1G056880.1	Barley	cytosol	54.75	51.25
TraesCS7D01G270700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	54.75	51.06
TraesCS7A01G270500.1	Wheat	mitochondrion, nucleus, peroxisome, plastid	54.37	50.71
EES14126	Sorghum	nucleus	55.13	48.33
Os08t0546900-01	Rice	cytosol, plasma membrane	47.91	48.09
Zm00001d052741_P001	Maize	cytosol	51.33	47.54
AT3G02700.1	Thale cress	cytosol	45.25	47.22
Zm00001d031737_P001	Maize	cytosol	51.71	46.9
AT5G06370.1	Thale cress	cytosol	46.01	46.72
AT5G16330.1	Thale cress	cytosol	38.02	41.32
HORVU5Hr1G080870.3	Barley	plastid	50.57	39.58
AT5G16360.1	Thale cress	cytosol	41.83	38.87

Protein Annotations

MapMan:35.2	EntrezGene:827986	UniProt:A0A178V3L9	ProteinID:AEE81954.1	ArrayExpress:AT4G00905	EnsemblPlantsGene:AT4G00905
RefSeq:AT4G00905	TAIR:AT4G00905	RefSeq:AT4G00905-TAIR-G	EnsemblPlants:AT4G00905.1	TAIR:AT4G00905.1	GO:GO:0005575
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:LRAT-like_dom	RefSeq:NP_680550.1	ProteinID:OAP00839.1
PFAM:PF04970	PO:PO:0000293	PANTHER:PTHR13943	PANTHER:PTHR13943:SF73	UniProt:Q3EAE0	UniParc:UPI0000162964
SEG:seg	:	:	:	:	:

Description

NC domain-containing protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q3EAE0]

Coordinates

chr4:+:387451..389403

Molecular Weight (calculated)

28382.2 Da

IEP (calculated)

8.812

GRAVY (calculated)

-0.037

Length

263 amino acids

Sequence
(BLAST)

001: MGVLTNKVER DELKPGDHIY TYRAVFAYSH HGVFVGGCKV VHFKPEHSLI SPTLASSSSS SSSSVSEVND SSEAPCPTYP DCGYKRPKSG VVLSCLDCFL
101: KKGSLYRFDY GVSSSIFLTR FRGGTCTTAP SDPLQTVIHR AMHLLQNGFG NYNVFQNNCE DFALYCKTGL LILDKNGVGR SGQASSIIGA PLAALLSSPL
201: TLLIPNPVGV ATVTAGMYCM SRYATDIGVR NDVIKVPVED LALNLGLKPL KRKRKACDTS ISR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.