Factsheet for Os09t0526800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021248_P002	Maize	cytosol	88.06	88.06
EER99225	Sorghum	cytosol	86.57	86.57
Zm00001d006180_P001	Maize	cytosol	84.7	84.7
TraesCS5D01G321200.1	Wheat	cytosol	84.33	84.33
TraesCS5B01G315900.1	Wheat	cytosol	83.96	83.96
TraesCS5A01G314900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	82.09	82.09
Os08t0546900-01	Rice	cytosol, plasma membrane	65.67	67.18
GSMUA_Achr9P00880_001	Banana	cytosol	67.16	66.67
Solyc01g096150.2.1	Tomato	cytosol	62.69	66.14
PGSC0003DMT400000664	Potato	cytosol	61.57	64.96
Solyc05g050520.2.1	Tomato	cytosol	61.57	64.71
VIT_15s0046g00120.t01	Wine grape	cytosol	61.94	63.36
KRG97211	Soybean	cytosol	60.82	62.93
KRH68934	Soybean	cytosol	60.45	62.79
Bra032627.1-P	Field mustard	cytosol	60.45	62.07
CDY51720	Canola	cytosol	57.09	61.94
AT1G01225.1	Thale cress	cytosol	60.07	61.92
CDY07154	Canola	cytosol	55.97	60.24
Bra037403.1-P	Field mustard	cytosol	55.97	60.24
CDY37998	Canola	cytosol	60.45	60.22
AT4G00905.1	Thale cress	cytosol	56.72	57.79
HORVU5Hr1G080870.3	Barley	plastid	72.39	57.74
PGSC0003DMT400012897	Potato	mitochondrion, nucleus	58.96	56.43
Solyc12g055850.1.1	Tomato	cytosol	57.84	54.2
Os05t0310600-01	Rice	cytosol	42.16	40.21

Protein Annotations

EMBL:AK060048	EMBL:AK105121	EnsemblPlants:Os09t0526800-01	EnsemblPlantsGene:Os09g0526800	EntrezGene:4347639	InterPro:LRAT-like_dom
PANTHER:PTHR13943	PANTHER:PTHR13943:SF32	PFAM:PF04970	ProteinID:BAD46360.1	ProteinID:BAF25642.1	ProteinID:BAT09057.1
ProteinID:EAZ45427.1	RefSeq:XP_015651153.1	SEG:seg	UniParc:UPI000043A550	UniProt:Q652A7	MapMan:35.2

Description

NC domain containing protein. (Os09t0526800-01);Similar to NC domain-containing protein. (Os09t0526800-02)

Coordinates

chr9:-:20606060..20609063

Molecular Weight (calculated)

29156.9 Da

IEP (calculated)

7.050

GRAVY (calculated)

-0.114

Length

268 amino acids

Sequence
(BLAST)

001: MGLLSNRVER SEIRPGDHIY TWRAVYAYSH HGIYVGGSKV VHFTRKKEAE GSDSSNSTSS LLLEPSSECP TFPDCGFQLP DSGVVLTCLD CFLRNGSLYC
101: FEYGVPSAVF LAKLRGGTCT IAQSDPSEVV VHRAMYLLQN GFGNYDIFEN NCEDFALYCK TGLLPVEEPG IGTSGQASSA IGVPLAALLS TPLKLFAAGP
201: LGMATVTAGM YCAGRYITDI GVRKDVAKIE VENLSSHLGR RLIEDEGSVN VRSEKPKTLL PMKRKRER

Best Arabidopsis Sequence Match ( AT1G01225.1 )
(BLAST)

001: MGLLTNKIER EELKPGDHIY TYRAIFAYSH HGIFVGGSKV VHFRPEHNPM DSSTSSISSS SSEDICSIFP DCGFRQPDSG VVLSCLDCFL KNGSLYCFEY
101: GVSPSVFLTK VRGGTCTTAQ SDTTDSVIHR AMYLLQNGFG NYDIFKNNCE DFALYCKTGL LIMDKLGVGR SGQASSIVGA PLAALLSSPF KLLIPSPIGV
201: ATVTAGMYCM SRYATDIGVR SDVIKVSVED LALNLDVKTI EQGEEEEEDE EEDSDTDYVR

Arabidopsis Description

At1g01225 [Source:UniProtKB/TrEMBL;Acc:Q29PY0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.