Factsheet for TraesCS5B01G315900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G321200.1	Wheat	cytosol	98.51	98.51
TraesCS5A01G314900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	94.03	94.03
Zm00001d021248_P002	Maize	cytosol	85.82	85.82
Os09t0526800-01	Rice	cytosol	83.96	83.96
EER99225	Sorghum	cytosol	83.58	83.58
Zm00001d006180_P001	Maize	cytosol	82.46	82.46
GSMUA_Achr9P00880_001	Banana	cytosol	69.03	68.52
TraesCS7B01G168500.1	Wheat	cytosol, mitochondrion, nucleus, plastid	70.15	66.67
HORVU5Hr1G080870.3	Barley	plastid	82.84	66.07
Solyc01g096150.2.1	Tomato	cytosol	61.19	64.57
PGSC0003DMT400000664	Potato	cytosol	60.82	64.17
VIT_15s0046g00120.t01	Wine grape	cytosol	60.82	62.21
Solyc05g050520.2.1	Tomato	cytosol	58.58	61.57
AT1G01225.1	Thale cress	cytosol	59.33	61.15
Bra032627.1-P	Field mustard	cytosol	59.33	60.92
KRG97211	Soybean	cytosol	58.58	60.62
CDY51720	Canola	cytosol	55.6	60.32
KRH68934	Soybean	cytosol	57.84	60.08
CDY07154	Canola	cytosol	55.22	59.44
Bra037403.1-P	Field mustard	cytosol	54.85	59.04
CDY37998	Canola	cytosol	58.96	58.74
AT4G00905.1	Thale cress	cytosol	56.34	57.41
PGSC0003DMT400012897	Potato	mitochondrion, nucleus	56.72	54.29
Solyc12g055850.1.1	Tomato	cytosol	56.34	52.8
TraesCS1B01G284400.1	Wheat	cytosol	47.76	46.38

Protein Annotations

EnsemblPlants:TraesCS5B01G315900.1	EnsemblPlantsGene:TraesCS5B01G315900	Gene3D:3.90.1720.10	InterPro:LRAT-like_dom	PANTHER:PTHR13943	PANTHER:PTHR13943:SF43
PFAM:PF04970	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr5B:-:497936160..497938609

Molecular Weight (calculated)

29093.9 Da

IEP (calculated)

8.313

GRAVY (calculated)

-0.051

Length

268 amino acids

Sequence
(BLAST)

001: MGLLSNRVER SEVRPGDHIY TWRAVYAYSH HGIYVGGSKV VHFTRKKEVE TSNSSNSISG LISRASSECP TFPDCGFQLA DSGVVLTCLD CFLGNGSLYC
101: FEYGVPPAIF LAKFRGGTCT IAQSDPSEVV VRRAMHLLQN GFGNYDIFEK NCEDFALYCK TGLVPVDEAG IGVSGQASSA IGVPLAALLS TPFKIFAAGP
201: LGMATVTAGM YCAGRYITDI GVRKDVAKVE VENLSSHLGF RRVEDAESVN RSSDKVKKLL PLKRKRER

Best Arabidopsis Sequence Match ( AT1G01225.1 )
(BLAST)

001: MGLLTNKIER EELKPGDHIY TYRAIFAYSH HGIFVGGSKV VHFRPEHNPM DSSTSSISSS SSEDICSIFP DCGFRQPDSG VVLSCLDCFL KNGSLYCFEY
101: GVSPSVFLTK VRGGTCTTAQ SDTTDSVIHR AMYLLQNGFG NYDIFKNNCE DFALYCKTGL LIMDKLGVGR SGQASSIVGA PLAALLSSPF KLLIPSPIGV
201: ATVTAGMYCM SRYATDIGVR SDVIKVSVED LALNLDVKTI EQGEEEEEDE EEDSDTDYVR

Arabidopsis Description

At1g01225 [Source:UniProtKB/TrEMBL;Acc:Q29PY0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.