CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, golgi, peroxisome

Predictor Summary:

plastid 2
golgi 2
extracellular 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, peroxisome
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98046	Soybean	cytosol	24.32	18.0
KRH30736	Soybean	cytosol, peroxisome, plastid	30.63	17.0
KRG98048	Soybean	cytosol	33.33	15.23
KRH30737	Soybean	cytosol	33.33	14.74
KRH17250	Soybean	cytosol	31.53	13.78
GSMUA_Achr7P05990_001	Banana	cytosol	28.83	12.6
CDY38121	Canola	cytosol	25.23	12.28
AT3G02700.1	Thale cress	cytosol	27.03	11.9
CDX78682	Canola	cytosol	25.23	11.76
CDX70686	Canola	cytosol	24.32	11.25
Bra021419.1-P	Field mustard	cytosol	27.03	11.24
CDY67201	Canola	cytosol	24.32	11.11
CDY72287	Canola	cytosol	26.13	11.11
AT5G16330.1	Thale cress	cytosol	23.42	10.74
Bra023561.1-P	Field mustard	cytosol	25.23	10.73
CDY38122	Canola	cytosol	25.23	10.69
CDY55574	Canola	cytosol	24.32	10.67
CDY53737	Canola	cytosol	27.03	10.64
Bra008622.1-P	Field mustard	cytosol	23.42	10.48
CDX69451	Canola	cytosol	24.32	10.47
KXG36301	Sorghum	cytosol	26.13	10.32
CDY55575	Canola	cytosol	23.42	10.24
CDX70687	Canola	plastid	24.32	10.23
KRH32851	Soybean	cytosol	23.42	10.04
Bra023560.1-P	Field mustard	cytosol	25.23	9.66
KRH72187	Soybean	cytosol	22.52	9.65
Os05t0310600-01	Rice	cytosol	24.32	9.61
AT5G16360.1	Thale cress	cytosol	24.32	9.54
Zm00001d021614_P001	Maize	mitochondrion	26.13	9.45
HORVU5Hr1G043560.3	Barley	mitochondrion	25.23	9.36
CDX78683	Canola	cytosol	25.23	9.3
Bra008623.1-P	Field mustard	cytosol	24.32	9.28
TraesCS5D01G142500.1	Wheat	mitochondrion	25.23	8.95
KRH68934	Soybean	cytosol	18.92	8.14
KRG97211	Soybean	cytosol	18.92	8.11
TraesCS5A01G135900.1	Wheat	mitochondrion	25.23	8.07
CDX85508	Canola	cytosol	6.31	3.35

Protein Annotations

EMBL:ACUP02010840	EnsemblPlants:KRG98047	EnsemblPlantsGene:GLYMA_18G047100	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LRAT-like_dom	PANTHER:PTHR13943	PANTHER:PTHR13943:SF41	PFAM:PF04970	ProteinID:KRG98047	ProteinID:KRG98047.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0006EDFC55	UniProt:A0A0R0EW56	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr18:+:4123041..4124369

Molecular Weight (calculated)

12813.7 Da

IEP (calculated)

9.645

GRAVY (calculated)

0.105

Length

111 amino acids

Sequence
(BLAST)

001: MGVLSNKIDK QLKPGDHIYS WRQAYIHAHH GIYDGEGMVI HFIRGPGQNR FLSCSSSSLL VLLMAFRAQY VERKQELKVA SVPVWIVFSL VDIYSYLSMQ
101: CQLYFFLAKA R

Best Arabidopsis Sequence Match ( AT3G02700.1 )
(BLAST)

001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT

Arabidopsis Description

At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.