Factsheet for Bra021419.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53737	Canola	cytosol	97.75	92.55
AT3G02700.1	Thale cress	cytosol	82.77	87.7
VIT_04s0069g01180.t01	Wine grape	cytosol	62.92	68.85
KRG98048	Soybean	cytosol	62.55	68.72
KRH30736	Soybean	cytosol, peroxisome, plastid	44.57	59.5
GSMUA_Achr7P05990_001	Banana	cytosol	55.81	58.66
Solyc02g081580.2.1	Tomato	cytosol	59.18	58.52
KRH30737	Soybean	cytosol	54.31	57.77
PGSC0003DMT400045756	Potato	cytosol	57.68	57.04
KRG98046	Soybean	cytosol	31.84	56.67
VIT_00s0270g00030.t01	Wine grape	cytosol	58.05	55.56
Bra008622.1-P	Field mustard	cytosol	51.31	55.24
KXG36301	Sorghum	cytosol	56.93	54.09
Bra023560.1-P	Field mustard	cytosol	58.43	53.79
Bra005893.1-P	Field mustard	cytosol	52.06	53.46
Os05t0310600-01	Rice	cytosol	55.43	52.67
Bra023561.1-P	Field mustard	cytosol	50.94	52.11
Bra008623.1-P	Field mustard	cytosol	55.06	50.52
Zm00001d021614_P001	Maize	mitochondrion	56.93	49.51
HORVU5Hr1G043560.3	Barley	mitochondrion	54.68	48.83
Bra032627.1-P	Field mustard	cytosol	45.32	46.36
TraesCS5D01G142500.1	Wheat	mitochondrion	54.31	46.33
Bra037403.1-P	Field mustard	cytosol	41.95	44.98
TraesCS5A01G135900.1	Wheat	mitochondrion	55.43	42.65
KRG98047	Soybean	cytosol, golgi, peroxisome	11.24	27.03

Protein Annotations

EnsemblPlants:Bra021419.1	EnsemblPlants:Bra021419.1-P	EnsemblPlantsGene:Bra021419	InterPro:LRAT-like_dom	PANTHER:PTHR13943	PANTHER:PTHR13943:SF32
PFAM:PF04970	SEG:seg	UniParc:UPI0002544AEF	UniProt:M4DY23	MapMan:35.2	:

Description

AT3G02700 (E=6e-123) | NC domain-containing protein

Coordinates

chrA01:-:25271170..25272481

Molecular Weight (calculated)

28688.0 Da

IEP (calculated)

5.330

GRAVY (calculated)

-0.070

Length

267 amino acids

Sequence
(BLAST)

001: MGFLSNKIAR DEVKPGDHIY SWRQAYVYAH HGIYVGEGQV NHFTRGDGQE TGTGTFLDNL IVSSSLNHGD TPCPNCGDRT KVGGVISSCL DCFLAGGDLY
101: VFEYSVSPAI FLAKPRGGTC TIGASDPPEE VIHRANFLLR NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVVLSS PLRFVAGFGS
201: LAVAGYGMYC ASRLVSDIGM RWDVSKVPVE RLVADMDDLA GMETKPEERL VTDMAGMETK PEDKKTS

Best Arabidopsis Sequence Match ( AT3G02700.1 )
(BLAST)

001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT

Arabidopsis Description

At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.