Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G043560.3 | Barley | mitochondrion | 70.32 | 81.61 |
| TraesCS5D01G142500.1 | Wheat | mitochondrion | 68.01 | 75.4 |
| Os05t0310600-01 | Rice | cytosol | 59.37 | 73.31 |
| KXG36301 | Sorghum | cytosol | 57.93 | 71.53 |
| Zm00001d021614_P001 | Maize | mitochondrion | 58.79 | 66.45 |
| VIT_04s0069g01180.t01 | Wine grape | cytosol | 45.82 | 65.16 |
| GSMUA_Achr7P05990_001 | Banana | cytosol | 47.55 | 64.96 |
| KRG98048 | Soybean | cytosol | 45.24 | 64.61 |
| KRH17250 | Soybean | cytosol | 46.4 | 63.39 |
| Solyc02g081580.2.1 | Tomato | cytosol | 46.11 | 59.26 |
| PGSC0003DMT400045756 | Potato | cytosol | 44.67 | 57.41 |
| AT3G02700.1 | Thale cress | cytosol | 40.92 | 56.35 |
| KRH30736 | Soybean | cytosol, peroxisome, plastid | 31.99 | 55.5 |
| Bra021419.1-P | Field mustard | cytosol | 42.65 | 55.43 |
| KRG98046 | Soybean | cytosol | 23.92 | 55.33 |
| KRH30737 | Soybean | cytosol | 39.77 | 54.98 |
| VIT_00s0270g00030.t01 | Wine grape | cytosol | 43.52 | 54.12 |
| CDY53737 | Canola | cytosol | 43.8 | 53.9 |
| CDX69451 | Canola | cytosol | 40.06 | 53.88 |
| CDX85508 | Canola | cytosol | 32.28 | 53.59 |
| CDY67201 | Canola | cytosol | 37.18 | 53.09 |
| CDY55574 | Canola | cytosol | 38.62 | 52.96 |
| CDX78682 | Canola | cytosol | 36.02 | 52.52 |
| CDX70686 | Canola | cytosol | 36.31 | 52.5 |
| CDY38122 | Canola | cytosol | 38.62 | 51.15 |
| AT5G16330.1 | Thale cress | cytosol | 35.16 | 50.41 |
| Bra008622.1-P | Field mustard | cytosol | 36.02 | 50.4 |
| CDY55575 | Canola | cytosol | 36.6 | 50.0 |
| CDY38121 | Canola | cytosol | 32.28 | 49.12 |
| TraesCS1A01G275200.1 | Wheat | cytosol | 38.9 | 48.91 |
| Bra023560.1-P | Field mustard | cytosol | 40.06 | 47.93 |
| Bra023561.1-P | Field mustard | cytosol | 35.45 | 47.13 |
| CDY72287 | Canola | cytosol | 35.16 | 46.74 |
| Bra008623.1-P | Field mustard | cytosol | 38.9 | 46.39 |
| AT5G16360.1 | Thale cress | cytosol | 37.46 | 45.94 |
| TraesCS7A01G270500.1 | Wheat | mitochondrion, nucleus, peroxisome, plastid | 37.18 | 45.74 |
| CDX78683 | Canola | cytosol | 37.75 | 43.52 |
| TraesCS5A01G314900.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 33.43 | 43.28 |
| CDX70687 | Canola | plastid | 32.56 | 42.8 |
| KRG98047 | Soybean | cytosol, golgi, peroxisome | 8.07 | 25.23 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G135900.1 | EnsemblPlantsGene:TraesCS5A01G135900 | InterPro:LRAT-like_dom | PANTHER:PTHR13943 | PANTHER:PTHR13943:SF32 | PFAM:PF04970 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:307205641..307207792
Molecular Weight (calculated)
36489.8 Da
IEP (calculated)
6.417
GRAVY (calculated)
0.024
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGVLSNRVG REALAAGDHI YSWRTAYIYA HHGIYAGDGM VIHFTRAVGH EIGTGTFLDK FLFSSSPTTA DGPPCEKCGH LIKPQGVIMS CLDCFLDGGS
101: LYLFDYAVSP PFFLAKARGG TCTMALSDAA QLVVHRAKHL LNNGFGMYSL FKNNCEDFAI YCKTELLVET AYSVGRSGQL ASLTAAFSAV ASSPLRFLTT
201: SASGLAIVTS GMYCVGRYVS DMGVRRDVIK VPVERLVEHW VNNVTPALPQ GATQAETATP GGLPELPEEG ELAKTATPGG SLELPGESEL AKTATLGGSR
301: ELPGEGELAK MATPGGLPEL PRESELAKTA TPGGSLELPG KGGLAKK
101: LYLFDYAVSP PFFLAKARGG TCTMALSDAA QLVVHRAKHL LNNGFGMYSL FKNNCEDFAI YCKTELLVET AYSVGRSGQL ASLTAAFSAV ASSPLRFLTT
201: SASGLAIVTS GMYCVGRYVS DMGVRRDVIK VPVERLVEHW VNNVTPALPQ GATQAETATP GGLPELPEEG ELAKTATPGG SLELPGESEL AKTATLGGSR
301: ELPGEGELAK MATPGGLPEL PRESELAKTA TPGGSLELPG KGGLAKK
001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT
Arabidopsis Description
At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.