Factsheet for GSMUA_Achr7P05990_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0069g01180.t01	Wine grape	cytosol	66.14	68.85
KRG98048	Soybean	cytosol	65.35	68.31
KRH17250	Soybean	cytosol	67.32	67.32
Solyc02g081580.2.1	Tomato	cytosol	66.54	62.59
KXG36301	Sorghum	cytosol	68.9	62.28
PGSC0003DMT400045756	Potato	cytosol	65.75	61.85
Os05t0310600-01	Rice	cytosol	66.14	59.79
KRG98046	Soybean	cytosol	34.65	58.67
KRH30736	Soybean	cytosol, peroxisome, plastid	46.06	58.5
AT3G02700.1	Thale cress	cytosol	57.87	58.33
Zm00001d021614_P001	Maize	mitochondrion	69.69	57.65
KRH30737	Soybean	cytosol	55.51	56.18
Bra021419.1-P	Field mustard	cytosol	58.66	55.81
VIT_00s0270g00030.t01	Wine grape	cytosol	60.63	55.2
HORVU5Hr1G043560.3	Barley	mitochondrion	64.96	55.18
CDY67201	Canola	cytosol	52.76	55.14
CDX78682	Canola	cytosol	51.18	54.62
CDX70686	Canola	cytosol	51.18	54.17
CDX69451	Canola	cytosol	54.72	53.88
CDY55574	Canola	cytosol	52.76	52.96
CDY53737	Canola	cytosol	58.66	52.84
TraesCS5D01G142500.1	Wheat	mitochondrion	64.96	52.72
AT5G16330.1	Thale cress	cytosol	49.61	52.07
CDX85508	Canola	cytosol	42.52	51.67
CDY38122	Canola	cytosol	52.36	50.76
CDY55575	Canola	cytosol	49.61	49.61
Bra008622.1-P	Field mustard	cytosol	48.43	49.6
CDY38121	Canola	cytosol	44.09	49.12
TraesCS5A01G135900.1	Wheat	mitochondrion	64.96	47.55
AT5G16360.1	Thale cress	cytosol	52.76	47.35
Bra008623.1-P	Field mustard	cytosol	53.94	47.08
Bra023560.1-P	Field mustard	cytosol	53.54	46.9
Bra023561.1-P	Field mustard	cytosol	48.03	46.74
CDY72287	Canola	cytosol	46.85	45.59
GSMUA_Achr9P00880_001	Banana	cytosol	47.64	44.81
CDX70687	Canola	plastid	45.67	43.94
CDX78683	Canola	cytosol	50.39	42.52
KRG98047	Soybean	cytosol, golgi, peroxisome	12.6	28.83

Protein Annotations

EnsemblPlants:GSMUA_Achr7P05990_001	EnsemblPlants:GSMUA_Achr7T05990_001	EnsemblPlantsGene:GSMUA_Achr7G05990_001	InterPro:LRAT-like_dom	PANTHER:PTHR13943	PANTHER:PTHR13943:SF32
PFAM:PF04970	SEG:seg	UniParc:UPI0002963F9D	UniProt:M0TF39	MapMan:35.2	:

Description

NC domain-containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G05990_001]

Coordinates

chr7:-:4432004..4435065

Molecular Weight (calculated)

27244.5 Da

IEP (calculated)

7.431

GRAVY (calculated)

0.099

Length

254 amino acids

Sequence
(BLAST)

001: MGVLSNKIER EQLKPGDHIY SWRSAYIYAH HGIYAGDSMV IHFTRAAGQE VGTGTILDQF IFSSSPSNTG TVCERCGDQS RLHGVIISCL DCFLSGGNLY
101: EFRYSVTPAF FISKARGGTC TLAASDPSDV VLHRARYLLD NNGFGMYSIF KNNCEDFAIY SKTGLLVETT FSVGRSGQIS SLTAALTAVA SSPLRFLTTS
201: PGGLIAVASS MYCIGRVVSD IGIRRDVNKI PVESLVAQLG RGEPETVTAT VPAG

Best Arabidopsis Sequence Match ( AT3G02700.1 )
(BLAST)

001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT

Arabidopsis Description

At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.