CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 2
cytosol 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98046	Soybean	cytosol	45.82	76.67
KRG98048	Soybean	cytosol	66.93	69.14
KRH17250	Soybean	cytosol	64.54	63.78
KRH30736	Soybean	cytosol, peroxisome, plastid	50.6	63.5
AT3G02700.1	Thale cress	cytosol	57.37	57.14
GSMUA_Achr7P05990_001	Banana	cytosol	56.18	55.51
Bra021419.1-P	Field mustard	cytosol	57.77	54.31
CDY53737	Canola	cytosol	57.77	51.42
KXG36301	Sorghum	cytosol	56.97	50.89
CDX78682	Canola	cytosol	47.41	50.0
CDX85508	Canola	cytosol	41.04	49.28
CDY38122	Canola	cytosol	51.39	49.24
Os05t0310600-01	Rice	cytosol	54.98	49.11
CDY67201	Canola	cytosol	47.41	48.97
CDX70686	Canola	cytosol	46.61	48.75
CDY55574	Canola	cytosol	48.21	47.83
CDY38121	Canola	cytosol	43.03	47.37
CDX69451	Canola	cytosol	48.61	47.29
Bra008622.1-P	Field mustard	cytosol	46.61	47.18
CDY55575	Canola	cytosol	47.41	46.85
KRH72187	Soybean	cytosol	48.21	46.72
KRH32851	Soybean	cytosol	48.21	46.72
Zm00001d021614_P001	Maize	mitochondrion	56.97	46.58
HORVU5Hr1G043560.3	Barley	mitochondrion	55.38	46.49
AT5G16330.1	Thale cress	cytosol	44.22	45.87
AT5G16360.1	Thale cress	cytosol	51.0	45.23
Bra023560.1-P	Field mustard	cytosol	52.19	45.17
TraesCS5D01G142500.1	Wheat	mitochondrion	54.98	44.09
Bra023561.1-P	Field mustard	cytosol	45.02	43.3
KRG97211	Soybean	cytosol	44.62	43.24
CDX70687	Canola	plastid	44.62	42.42
Bra008623.1-P	Field mustard	cytosol	49.0	42.27
KRH68934	Soybean	cytosol	43.43	42.25
CDY72287	Canola	cytosol	43.82	42.15
CDX78683	Canola	cytosol	48.21	40.2
TraesCS5A01G135900.1	Wheat	mitochondrion	54.98	39.77
KRG98047	Soybean	cytosol, golgi, peroxisome	14.74	33.33

Protein Annotations

EMBL:ACUP02007061	EnsemblPlants:KRH30737	EnsemblPlantsGene:GLYMA_11G203900	EntrezGene:100783305	Gene3D:3.90.1720.10	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:LRAT-like_dom	PANTHER:PTHR13943	PANTHER:PTHR13943:SF41	PFAM:PF04970
ProteinID:KRH30737	ProteinID:KRH30737.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000233CE38	UniProt:I1LM25
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:28414094..28415196

Molecular Weight (calculated)

27458.5 Da

IEP (calculated)

8.841

GRAVY (calculated)

0.170

Length

251 amino acids

Sequence
(BLAST)

001: MGVFSNKIDR KQLKPGDHIY SWRQAYIIAH HGIYVGKGMV IHFTRGSSQE TETRTMLGGF YLSSPHHASR DTPCPKCGYQ TKTEGVTQTC LDCFLYGGYL
101: YLFEYGVSPA FFLAKARGGT CTIASSDSTE AILRRAFFLL KKGFGGYHLF KNNCEDFAMY CKTGLLLVRT SIMSVGQSGQ ATSLLAAAGA IVSSSLVFMI
201: TSLCGLALVG CAMYCVSRYV SDIGVRCDVT KVSVKKVPMV VKEDWVGEII S

Best Arabidopsis Sequence Match ( AT3G02700.1 )
(BLAST)

001: MGFLSNKISR DDVKPGDHIY SWRQAYIYAH HGIYVGNGQV NHFTRGDGQE TGTGTFLDNI IVSSSHNHGD NPCPDCGDRS NLGGVISSCL ECFLAGGDLY
101: VFEYSVSPAI FLAKPRGGVC TIASSDPPEE VIYRANFLLQ NGFGVYNVFK NNCEDFAIYC KTGLLVANTD VGRSGQAASI VAAASVLLSS PLRFVAGFGG
201: LAVAGYGMYC TSRLVSDIGM RWDVSKVPVE RLVADVACMS DMEAKPEDEK TT

Arabidopsis Description

At3g02700 [Source:UniProtKB/TrEMBL;Acc:Q9M872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.