Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G405400.1 | Wheat | cytosol | 48.11 | 47.34 |
| Zm00001d046887_P001 | Maize | cytosol | 54.59 | 46.98 |
| KXG36301 | Sorghum | cytosol | 22.16 | 14.59 |
| EER99225 | Sorghum | cytosol | 20.54 | 14.18 |
| EES14126 | Sorghum | nucleus | 21.62 | 13.33 |
| EES19605 | Sorghum | cytosol | 18.92 | 12.73 |
Protein Annotations
| EnsemblPlants:EES15505 | EnsemblPlantsGene:SORBI_3008G004700 | InterPro:LRAT-like_dom | PANTHER:PTHR13943 | PANTHER:PTHR13943:SF41 | PFAM:PF04970 |
| ProteinID:EES15505 | ProteinID:EES15505.2 | UniParc:UPI00081AD69F | UniProt:C5YQ17 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr8:-:420429..421162
Molecular Weight (calculated)
21377.5 Da
IEP (calculated)
7.111
GRAVY (calculated)
-0.168
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRGVTVLSS RVERWQLRRG DHIYAWRKGL AYTYSHHGIY ENDEKVIHFT SSLALSSIPP ETCSRCREAM RGGGVIICCL NCFLEGNSIC LFIYSVPWWF
101: YNLSNIGVQD TCSMEDEDPP ETVLHRANNL RVHGFGSYNL ALRNCFDFAF YCKTGHPYFS LLEMVVEPSA VSESDLRRAI RRWLF
101: YNLSNIGVQD TCSMEDEDPP ETVLHRANNL RVHGFGSYNL ALRNCFDFAF YCKTGHPYFS LLEMVVEPSA VSESDLRRAI RRWLF
001: MGLLSNRIDR SSLKPGDHIY SWRTAYIYAH HGIYVGDDRV IHFTRRGQEV GTGTVLDLIL VSSGPSRNHT HCPTCVPPNE GHGVVSSCLN CFLAGGVLYR
101: FEYSVNAAHF LVKARGGTCT LAVADPNEIV VHRAKHLLQN GFGCYDVFKN NCEDFAIYCK TALLVLEGRT MGQSGQAVSI IGGPIAAVLS TPMRLLTTNV
201: YGMAATAIGV YCASRYATDI GMRADVAKVE AEDLTRRLSS GLFQVLDPPL AAIALPSTS
101: FEYSVNAAHF LVKARGGTCT LAVADPNEIV VHRAKHLLQN GFGCYDVFKN NCEDFAIYCK TALLVLEGRT MGQSGQAVSI IGGPIAAVLS TPMRLLTTNV
201: YGMAATAIGV YCASRYATDI GMRADVAKVE AEDLTRRLSS GLFQVLDPPL AAIALPSTS
Arabidopsis Description
AT5g06370/MHF15_11 [Source:UniProtKB/TrEMBL;Acc:Q93V51]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.