Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G089720.1 | Barley | nucleus | 87.31 | 86.87 |
| TraesCSU01G019400.1 | Wheat | cytosol | 22.34 | 56.77 |
| TraesCSU01G018500.1 | Wheat | cytosol | 24.62 | 48.74 |
| TraesCSU01G124300.1 | Wheat | cytosol | 36.55 | 48.0 |
| TraesCSU01G018900.1 | Wheat | endoplasmic reticulum, extracellular | 28.17 | 44.4 |
| TraesCSU01G094900.1 | Wheat | cytosol | 16.24 | 42.95 |
| TraesCSU01G095200.1 | Wheat | cytosol | 13.96 | 38.46 |
| CDX79728 | Canola | cytosol | 17.51 | 30.4 |
| TraesCSU01G035100.1 | Wheat | nucleus | 23.1 | 26.3 |
| TraesCSU01G095100.1 | Wheat | cytosol | 14.97 | 24.48 |
| TraesCSU01G125900.1 | Wheat | cytosol | 16.75 | 21.15 |
Protein Annotations
| EnsemblPlants:TraesCSU01G140400.1 | EnsemblPlantsGene:TraesCSU01G140400 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PANTHER:PTHR10666 | PANTHER:PTHR10666:SF239 |
| PFAM:PF00240 | PFscan:PS50053 | PRINTS:PR00348 | SEG:seg | SMART:SM00213 | SUPFAM:SSF54236 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:134245393..134247833
Molecular Weight (calculated)
44676.0 Da
IEP (calculated)
9.041
GRAVY (calculated)
-0.503
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDGGPEAAP LEFPSAEWRR VYDRLQGLLP RVEALAADRA RLEEAIKLSD AREKSLHARL LQAEASRERW KAAYTELPPG ANPKLAELQE RDLVDSEARE
101: ALPDVDNSQL KVTSQKRRKL TNGETSQKKR MKLTNGDTSK EKCTKLTNEM HLQRCTMQIF VKINCSIFLK KRKTHCLKTI TLEVMRSNTI YDVKEKIQDK
201: EGIPAVQQRL MFGSELLVDS CCLEDYNIVE ESTLTLDLVP QGMHIFIRAR SGKIMTIGVD GEDSLYSVKA KFFDETGIPP GRQRLFFAGK QLEDGRTLAD
301: YDVQNESTLH VAFRGITRRS GQMRISVRTV TGKKVIERAM KRRQAVDNIK AWIYSELCIL PEEQQLSGED GAPLAEVIRR SCIVVLQIRP PGGW
101: ALPDVDNSQL KVTSQKRRKL TNGETSQKKR MKLTNGDTSK EKCTKLTNEM HLQRCTMQIF VKINCSIFLK KRKTHCLKTI TLEVMRSNTI YDVKEKIQDK
201: EGIPAVQQRL MFGSELLVDS CCLEDYNIVE ESTLTLDLVP QGMHIFIRAR SGKIMTIGVD GEDSLYSVKA KFFDETGIPP GRQRLFFAGK QLEDGRTLAD
301: YDVQNESTLH VAFRGITRRS GQMRISVRTV TGKKVIERAM KRRQAVDNIK AWIYSELCIL PEEQQLSGED GAPLAEVIRR SCIVVLQIRP PGGW
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF
Arabidopsis Description
UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.