Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G019400.1 | Wheat | cytosol | 58.04 | 53.55 |
| TraesCS7A01G105400.1 | Wheat | cytosol | 51.75 | 51.03 |
| TraesCS7A01G105500.1 | Wheat | cytosol | 48.25 | 50.37 |
| TraesCSU01G094900.1 | Wheat | cytosol | 52.45 | 50.34 |
| TraesCS7D01G100100.1 | Wheat | cytosol | 69.23 | 41.25 |
| TraesCSU01G095100.1 | Wheat | cytosol | 69.23 | 41.08 |
| KRH38035 | Soybean | cytosol | 34.97 | 38.46 |
| KXG38689 | Sorghum | cytosol | 36.36 | 37.96 |
| TraesCSU01G018500.1 | Wheat | cytosol | 47.55 | 34.17 |
| TraesCSU01G018900.1 | Wheat | endoplasmic reticulum, extracellular | 58.04 | 33.2 |
| HORVU5Hr1G019600.6 | Barley | cytosol | 43.36 | 32.98 |
| HORVU6Hr1G020140.6 | Barley | cytosol | 38.46 | 28.65 |
| TraesCSU01G125900.1 | Wheat | cytosol | 46.85 | 21.47 |
| TraesCSU01G124300.1 | Wheat | cytosol | 39.16 | 18.67 |
| TraesCSU01G035100.1 | Wheat | nucleus | 38.46 | 15.9 |
| TraesCSU01G140400.1 | Wheat | nucleus | 38.46 | 13.96 |
| PGSC0003DMT400033485 | Potato | cytosol | 15.38 | 10.63 |
| Solyc03g005610.2.1 | Tomato | cytosol | 21.68 | 7.71 |
| HORVU5Hr1G094230.2 | Barley | cytosol | 35.66 | 7.46 |
| GSMUA_Achr9P30160_001 | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCSU01G095200.1 | EnsemblPlantsGene:TraesCSU01G095200 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_CS | InterPro:Ubiquitin_dom | PANTHER:PTHR10666 |
| PANTHER:PTHR10666:SF238 | PFAM:PF00240 | PFscan:PS50053 | PRINTS:PR00348 | ScanProsite:PS00299 | SMART:SM00213 |
| SUPFAM:SSF54236 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:83973018..83973449
Molecular Weight (calculated)
16530.9 Da
IEP (calculated)
6.677
GRAVY (calculated)
-0.397
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLFVETFIG TMISINVDPS DTINVVKAKI QDQQRLTFGE DELEDRRTVA DYGIKDESTI RLHLRCLRRK IRIYLKGLTG KTTTHHFENL DTIACVKAMI
101: QDRDGIPTDY QKLIYAGKHL EDGRTMDDYA IQDDATFHLV LRL
101: QDRDGIPTDY QKLIYAGKHL EDGRTMDDYA IQDDATFHLV LRL
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF
Arabidopsis Description
UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.