CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02501	Soybean	cytosol	64.62	54.9
HORVU5Hr1G019600.6	Barley	cytosol	60.77	42.02
KRH43738	Soybean	cytosol	49.23	41.56
KRH13718	Soybean	cytosol, endoplasmic reticulum, nucleus	49.23	41.56
KRH67947	Soybean	cytosol	36.15	36.72
KRH64348	Soybean	cytosol, endoplasmic reticulum	36.15	36.72
KRH53585	Soybean	cytosol	36.15	36.72
KRG96204	Soybean	cytosol	36.15	36.72
TraesCSU01G095200.1	Wheat	cytosol	38.46	34.97
TraesCSU01G094900.1	Wheat	cytosol	40.0	34.9
HORVU6Hr1G020140.6	Barley	cytosol	50.0	33.85
OQU89357	Sorghum	cytosol, extracellular	31.54	32.54
KRH74571	Soybean	cytosol	37.69	31.61
KRH69588	Soybean	nucleus	37.69	31.61
KRH11776	Soybean	nucleus	37.69	31.61
KRH36782	Soybean	nucleus	37.69	31.61
TraesCS6A01G119700.2	Wheat	cytosol	53.85	30.57
TraesCS5D01G087500.1	Wheat	cytosol	53.85	30.57
KRH19455	Soybean	cytosol	70.0	29.84
KRG91230	Soybean	cytosol	70.0	29.84
KRH35592	Soybean	cytosol	70.0	29.84
KRH32433	Soybean	cytosol, endoplasmic reticulum	70.0	29.74
KRG99541	Soybean	cytosol	23.85	27.93
KRH19453	Soybean	cytosol	70.0	23.88
KRH19844	Soybean	cytosol	40.77	23.04
TraesCSU01G095100.1	Wheat	cytosol	36.15	19.5
KRH02499	Soybean	cytosol	53.08	18.11
TraesCS5D01G391800.1	Wheat	mitochondrion	39.23	17.59
PGSC0003DMT400033485	Potato	cytosol	25.38	15.94
KRH20404	Soybean	cytosol	51.54	14.66
TraesCS5B01G386500.1	Wheat	nucleus	40.0	13.47
KRH50099	Soybean	cytosol, endoplasmic reticulum, nucleus	51.54	12.57
KRH20401	Soybean	cytosol	51.54	12.57
Solyc03g005610.2.1	Tomato	cytosol	26.92	8.71
HORVU5Hr1G094230.2	Barley	cytosol	38.46	7.31
TraesCS5B01G387000.1	Wheat	cytosol	36.15	6.87
GSMUA_Achr9P30160_001	Banana	cytosol	1.54	2.6

Protein Annotations

EMBL:ACUP02005584	EnsemblPlants:KRH38035	EnsemblPlantsGene:GLYMA_09G105700	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666
PANTHER:PTHR10666:SF240	PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ProteinID:KRH38035	ProteinID:KRH38035.1
SMART:SM00213	SUPFAM:SSF54236	UniParc:UPI0006ED8C3F	UniProt:A0A0R0ICM5	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr9:+:19676982..19678129

Molecular Weight (calculated)

14768.2 Da

IEP (calculated)

8.745

GRAVY (calculated)

-0.178

Length

130 amino acids

Sequence
(BLAST)

001: MMSQNNLLQP FNSKLVHRGH KLLITIFAGI LPDQQRLIFV GKQLEDGRTL VDYNIQNEST LHLVLRLRGG MQIFVKTLIG KTITLEVESC DTIDNVKAKI
101: QDKEDGRTLA DYDIQKESIL HLPLRLRGGC

Best Arabidopsis Sequence Match ( AT1G55060.1 )
(BLAST)

001: MQIFLKTLTG KTKVLEVESS DTIDNVKAKI QDIEGIPPDQ HRLIFAGKQL EDGRTLADYN VQEDSTLHLL LRFRGGMQIF VKTLTGKTIT LEVESSDTID
101: NLKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGISP DQQRLIFAGK
201: QHEDGRTLAD YNIQKESTLH LVLRLRGGSF

Arabidopsis Description

UBQ12Polyubiquitin 12 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7K8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.