CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39163	Canola	cytosol	24.15	91.09
KRH32433	Soybean	cytosol, endoplasmic reticulum	72.44	90.2
KRH19844	Soybean	cytosol	52.49	86.96
TraesCS7D01G443100.1	Wheat	cytosol	52.23	86.9
TraesCS2A01G408500.1	Wheat	cytosol	51.18	85.15
TraesCS6D01G248600.1	Wheat	cytosol	32.81	81.17
TraesCS7B01G366700.1	Wheat	cytosol	32.55	81.05
TraesCS7B01G366600.1	Wheat	cytosol	32.55	79.49
PGSC0003DMT400037401	Potato	cytosol	79.53	79.11
KRH02501	Soybean	cytosol	30.18	75.16
KRH19455	Soybean	cytosol	59.84	74.75
KRG91230	Soybean	cytosol	59.84	74.75
KRH35592	Soybean	cytosol	59.84	74.75
KRH19453	Soybean	cytosol	72.18	72.18
KRH13718	Soybean	cytosol, endoplasmic reticulum, nucleus	28.61	70.78
KRH43738	Soybean	cytosol	28.61	70.78
TraesCS7B01G354000.2	Wheat	cytosol	57.22	70.55
TraesCS6D01G125600.1	Wheat	cytosol	59.84	69.09
KRH50099	Soybean	cytosol, endoplasmic reticulum, nucleus	96.06	68.67
KRH20401	Soybean	cytosol	96.06	68.67
KRH64348	Soybean	cytosol, endoplasmic reticulum	22.83	67.97
KRH67947	Soybean	cytosol	22.83	67.97
KRG96204	Soybean	cytosol	22.83	67.97
KRH53585	Soybean	cytosol	22.83	67.97
Solyc11g005670.1.1	Tomato	cytosol, nucleus	90.29	64.42
KRH74571	Soybean	cytosol	24.93	61.29
KRH11776	Soybean	nucleus	24.93	61.29
KRH69588	Soybean	nucleus	24.93	61.29
KRH36782	Soybean	nucleus	24.67	60.65
KRG99541	Soybean	cytosol	16.27	55.86
HORVU7Hr1G103330.1	Barley	cytosol	55.91	54.2
KRH38035	Soybean	cytosol	18.11	53.08
Os04t0628100-01	Rice	plasma membrane	50.92	49.49
KRH20404	Soybean	cytosol	56.17	46.83
KXG29531	Sorghum	cytosol	50.39	42.01
TraesCS6B01G293300.1	Wheat	plastid	32.55	40.66

Protein Annotations

EntrezGene:100782546	MapMan:19.2.2.1.1	Gene3D:3.10.20.90	EMBL:ACUP02010309	EnsemblPlantsGene:GLYMA_17G042100	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	UniProt:I1MS00	InterPro:IPR000626	EnsemblPlants:KRH02499	ProteinID:KRH02499
ProteinID:KRH02499.1	PFAM:PF00240	PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR45095
PANTHER:PTHR45095:SF2	SMART:SM00213	SUPFAM:SSF54236	UniParc:UPI000150073C	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf
InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:3123414..3125634

Molecular Weight (calculated)

42657.6 Da

IEP (calculated)

7.709

GRAVY (calculated)

-0.437

Length

381 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG C

Best Arabidopsis Sequence Match ( AT5G20620.1 )
(BLAST)

Arabidopsis Description

UBQ4Polyubiquitin 4 [Source:UniProtKB/Swiss-Prot;Acc:P0CH32]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.