Factsheet for TraesCS6D01G248600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G454100.1	Wheat	cytosol, golgi, unclear	49.35	98.7
TraesCS7D01G442900.1	Wheat	cytosol	97.4	98.04
TraesCS7B01G366600.1	Wheat	cytosol	98.05	96.79
TraesCS7D01G453100.1	Wheat	cytosol	93.51	92.9
TraesCS2D01G474700.1	Wheat	cytosol	42.21	84.42
TraesCS5D01G231400.1	Wheat	cytosol	80.52	81.05
TraesCS7D01G494400.1	Wheat	cytosol	79.87	80.39
TraesCS6D01G136800.1	Wheat	cytosol	72.73	77.24
TraesCS7D01G143000.1	Wheat	cytosol	77.27	76.77
CDY39163	Canola	cytosol	50.0	76.24
TraesCS1D01G206100.1	Wheat	cytosol	75.97	75.48
TraesCS1D01G206400.1	Wheat	cytosol	74.03	73.55
TraesCS4D01G218300.1	Wheat	cytosol	53.9	67.48
TraesCS6D01G109600.1	Wheat	cytosol	98.7	66.38
TraesCS7D01G443100.1	Wheat	cytosol	98.05	65.94
TraesCS4D01G006900.1	Wheat	cytosol	55.19	65.89
TraesCS2D01G405500.1	Wheat	cytosol	97.4	65.79
TraesCS2A01G408500.1	Wheat	cytosol	94.81	63.76
TraesCS5D01G269800.1	Wheat	cytosol	53.9	61.48
TraesCS6D01G137400.1	Wheat	cytosol	52.6	60.0
TraesCS7D01G474200.1	Wheat	cytosol	53.25	58.99
TraesCS2D01G458600.1	Wheat	cytosol	53.9	58.45
TraesCS7D01G474300.1	Wheat	cytosol	52.6	58.27
TraesCS2D01G458700.1	Wheat	cytosol	53.25	57.75
TraesCS1D01G228700.1	Wheat	cytosol	51.3	56.83
TraesCS1D01G405400.1	Wheat	cytosol	57.14	56.77
TraesCS1D01G109800.1	Wheat	cytosol	57.14	56.77
TraesCS4D01G218400.1	Wheat	cytosol	55.19	56.29
TraesCS2D01G580700.1	Wheat	cytosol	48.7	53.96
TraesCS4D01G234300.1	Wheat	cytosol	55.19	53.8
TraesCS1D01G174700.1	Wheat	cytosol	56.49	53.7
TraesCS2D01G459100.1	Wheat	cytosol	46.1	51.45
TraesCS2D01G459200.1	Wheat	cytosol	45.45	50.72
TraesCS2D01G459000.1	Wheat	cytosol	44.81	50.0
TraesCS7D01G442700.1	Wheat	cytosol, nucleus	98.7	49.84
TraesCS7D01G466600.1	Wheat	cytosol	49.35	49.67
TraesCS6B01G293300.1	Wheat	plastid	98.05	49.51
TraesCS3D01G510800.1	Wheat	cytosol	71.43	49.11
TraesCS3D01G510600.1	Wheat	cytosol	70.78	48.66
TraesCS5D01G194700.1	Wheat	cytosol	44.81	48.25
TraesCS3D01G510400.1	Wheat	mitochondrion	68.18	46.88
TraesCS3D01G511200.1	Wheat	cytosol	60.39	41.89
TraesCS5D01G087500.1	Wheat	cytosol	61.69	41.48
TraesCS2D01G092300.1	Wheat	cytosol	38.96	41.1
TraesCS2D01G092200.1	Wheat	cytosol	39.61	39.61
TraesCS6D01G125600.1	Wheat	cytosol	81.17	37.88
Os04t0628100-01	Rice	plasma membrane	96.1	37.76
TraesCS1D01G427100.1	Wheat	cytosol	55.19	37.44
TraesCS3D01G039700.1	Wheat	cytosol	54.55	37.17
TraesCS3D01G510200.1	Wheat	cytosol	53.25	36.44
TraesCS3D01G510700.1	Wheat	cytosol, nucleus, plastid	68.83	35.81
TraesCS3D01G511000.1	Wheat	cytosol	65.58	34.12
TraesCS3D01G510900.1	Wheat	nucleus	64.94	33.56
TraesCS3D01G510300.2	Wheat	nucleus	64.29	33.33
TraesCS7D01G100100.1	Wheat	cytosol	51.95	33.33
KRH02499	Soybean	cytosol	81.17	32.81
TraesCS3D01G511900.1	Wheat	mitochondrion	70.13	32.73
PGSC0003DMT400037401	Potato	cytosol	81.17	32.64
TraesCS3D01G511500.1	Wheat	nucleus	62.34	32.11
HORVU7Hr1G103330.1	Barley	cytosol	81.17	31.81
KXG29531	Sorghum	cytosol	93.51	31.51
TraesCS5D01G391800.1	Wheat	mitochondrion	53.25	28.28
TraesCS7D01G024600.1	Wheat	cytosol, mitochondrion	64.29	26.98
Solyc11g005670.1.1	Tomato	cytosol, nucleus	93.51	26.97
TraesCS3D01G510500.1	Wheat	mitochondrion	19.48	26.32
TraesCS1D01G314000.1	Wheat	cytosol	63.64	16.61

Protein Annotations

EnsemblPlants:TraesCS6D01G248600.1	EnsemblPlantsGene:TraesCS6D01G248600	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	PANTHER:PTHR10666
PANTHER:PTHR10666:SF242	PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ScanProsite:PS00299	SMART:SM00213
SUPFAM:SSF54236	TIGR:cd01803	MapMan:19.2.2.1.1	:	:	:

Description

No Description!

Coordinates

chr6D:+:351986872..351988037

Molecular Weight (calculated)

17313.0 Da

IEP (calculated)

8.891

GRAVY (calculated)

-0.379

Length

154 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKV GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGYF

Best Arabidopsis Sequence Match ( AT4G05050.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.