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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G35635.1 TraesCS3A01G099400.1 AT2G01950.1 19000166
AT2G35635.1 TraesCS3B01G115800.1 AT2G01950.1 19000166
AT2G35635.1 TraesCS3D01G099700.1 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G147500.1 Wheat cytosol 98.62 93.46
TraesCS6B01G176000.1 Wheat cytosol 98.62 93.46
TraesCS5A01G224000.1 Wheat cytosol 97.93 92.81
TraesCS5D01G231400.1 Wheat cytosol 97.24 92.16
TraesCS7D01G494400.1 Wheat cytosol 97.24 92.16
AT2G35635.1 Thale cress cytosol 96.55 90.91
CDY31710 Canola cytosol 97.24 89.24
CDX84182 Canola cytosol 97.24 88.68
TraesCS7D01G454100.1 Wheat cytosol, golgi, unclear 45.52 85.71
TraesCS1D01G206400.1 Wheat cytosol 91.03 85.16
TraesCS1D01G206100.1 Wheat cytosol 91.03 85.16
GSMUA_Achr4P04260_001 Banana cytosol 60.69 84.62
TraesCS7D01G143000.1 Wheat cytosol 90.34 84.52
TraesCS7D01G442900.1 Wheat cytosol 77.24 73.2
TraesCS6D01G248600.1 Wheat cytosol 77.24 72.73
HORVU6Hr1G029050.1 Barley cytosol 94.48 69.19
TraesCS7D01G453100.1 Wheat cytosol 73.79 69.03
Zm00001d020511_P001 Maize plastid 78.62 59.69
TraesCS4D01G218300.1 Wheat cytosol 48.28 56.91
TraesCS4D01G006900.1 Wheat cytosol 49.66 55.81
TraesCS5D01G269800.1 Wheat cytosol 48.28 51.85
TraesCS2D01G474700.1 Wheat cytosol 26.9 50.65
TraesCS6D01G137400.1 Wheat cytosol 46.9 50.37
TraesCS2D01G458600.1 Wheat cytosol 48.97 50.0
TraesCS7D01G474200.1 Wheat cytosol 47.59 49.64
TraesCS6D01G109600.1 Wheat cytosol 77.93 49.34
TraesCS2D01G458700.1 Wheat cytosol 48.28 49.3
TraesCS1D01G405400.1 Wheat cytosol 52.41 49.03
TraesCS1D01G109800.1 Wheat cytosol 52.41 49.03
TraesCS7D01G474300.1 Wheat cytosol 46.9 48.92
TraesCS7D01G443100.1 Wheat cytosol 77.24 48.91
TraesCS2D01G405500.1 Wheat cytosol 76.55 48.68
TraesCS1D01G228700.1 Wheat cytosol 46.21 48.2
TraesCS4D01G218400.1 Wheat cytosol 49.66 47.68
TraesCS1D01G174700.1 Wheat cytosol 51.72 46.3
TraesCS2D01G580700.1 Wheat cytosol 44.14 46.04
TraesCS4D01G234300.1 Wheat cytosol 49.66 45.57
TraesCS2D01G459100.1 Wheat cytosol 41.38 43.48
TraesCS2D01G459200.1 Wheat cytosol 41.38 43.48
TraesCS2D01G459000.1 Wheat cytosol 40.69 42.75
TraesCS5D01G194700.1 Wheat cytosol 40.69 41.26
TraesCS3D01G510600.1 Wheat cytosol 57.93 37.5
TraesCS3D01G510800.1 Wheat cytosol 57.24 37.05
TraesCS7D01G442700.1 Wheat cytosol, nucleus 77.93 37.05
TraesCS3D01G510400.1 Wheat mitochondrion 55.17 35.71
TraesCS2D01G092300.1 Wheat cytosol 35.17 34.93
TraesCS2D01G092200.1 Wheat cytosol 35.17 33.12
TraesCS3D01G039700.1 Wheat cytosol 48.97 31.42
TraesCS3D01G511200.1 Wheat cytosol 47.59 31.08
TraesCS7D01G466600.1 Wheat cytosol 32.41 30.72
TraesCS6D01G125600.1 Wheat cytosol 68.97 30.3
TraesCS3D01G510200.1 Wheat cytosol 46.21 29.78
TraesCS5D01G087500.1 Wheat cytosol 46.21 29.26
TraesCS3D01G510700.1 Wheat cytosol, nucleus, plastid 56.55 27.7
TraesCS1D01G427100.1 Wheat cytosol 42.76 27.31
TraesCS3D01G510300.2 Wheat nucleus 54.48 26.6
TraesCS3D01G511000.1 Wheat cytosol 53.1 26.01
TraesCS3D01G511900.1 Wheat mitochondrion 57.93 25.45
TraesCS7D01G100100.1 Wheat cytosol 42.07 25.42
TraesCS3D01G511500.1 Wheat nucleus 51.72 25.08
TraesCS3D01G510900.1 Wheat nucleus 50.34 24.5
TraesCS3D01G510500.1 Wheat mitochondrion 17.24 21.93
TraesCS7D01G024600.1 Wheat cytosol, mitochondrion 54.48 21.53
TraesCS5D01G391800.1 Wheat mitochondrion 41.38 20.69
TraesCS1D01G314000.1 Wheat cytosol 52.41 12.88
Protein Annotations
EnsemblPlants:TraesCS6D01G136800.1EnsemblPlantsGene:TraesCS6D01G136800Gene3D:3.10.20.90GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR000626InterPro:Nedd8-likeInterPro:UbiquitinInterPro:Ubiquitin-like_domsfInterPro:Ubiquitin_CSInterPro:Ubiquitin_dom
PANTHER:PTHR10666PANTHER:PTHR10666:SF230PFAM:PF00240PFscan:PS50053PRINTS:PR00348ScanProsite:PS00299
SMART:SM00213SUPFAM:SSF54236TIGR:cd01806MapMan:19.2.2.1.1MapMan:19.2.2.3.1:
Description
No Description!
Coordinates
chr6D:+:105544381..105553362
Molecular Weight (calculated)
16147.4 Da
IEP (calculated)
5.752
GRAVY (calculated)
-0.568
Length
145 amino acids
Sequence
(BLAST)
001: MGKTITLEVE SSDTVDNVKA KIQDKEGIPP DQQRLIFAGK QLEDGRTLAD YNIQKESTLH LVLRLRGGTM IKVKTLTGKE IEIDIEPTDT TDRIKERVEE
101: KEGIPPVQQR LIYAGKQLAD DKTAKDYNIE GGSVLHLVLA LRGGH
Best Arabidopsis Sequence Match ( AT1G31340.1 )
(BLAST)
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYNIEGG SVLHLVLALR GGFGLL
Arabidopsis Description
RUB1RUB1 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.