Factsheet for TraesCS3D01G510200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G510500.1	Wheat	mitochondrion	32.0	63.16
TraesCS3D01G510800.1	Wheat	cytosol	61.33	61.61
TraesCS3D01G510600.1	Wheat	cytosol	60.0	60.27
TraesCS3D01G510400.1	Wheat	mitochondrion	58.67	58.93
TraesCS3B01G567300.1	Wheat	mitochondrion	56.44	58.26
TraesCS3D01G511200.1	Wheat	cytosol	57.33	58.11
TraesCS3A01G504400.1	Wheat	cytosol	57.78	58.04
TraesCS3B01G567200.1	Wheat	mitochondrion	57.33	57.59
TraesCS6D01G248600.1	Wheat	cytosol	36.44	53.25
TraesCS7D01G442900.1	Wheat	cytosol	36.0	52.94
TraesCS7D01G453100.1	Wheat	cytosol	35.11	50.97
TraesCS7D01G454100.1	Wheat	cytosol, golgi, unclear	17.33	50.65
OQU83265	Sorghum	cytosol	48.44	49.32
HORVU3Hr1G111000.1	Barley	cytosol	33.33	49.02
TraesCS2D01G474700.1	Wheat	cytosol	16.0	46.75
TraesCS6D01G136800.1	Wheat	cytosol	29.78	46.21
TraesCS7D01G143000.1	Wheat	cytosol	30.67	44.52
TraesCS5D01G231400.1	Wheat	cytosol	30.22	44.44
TraesCS7D01G494400.1	Wheat	cytosol	30.22	44.44
TraesCS3D01G510700.1	Wheat	cytosol, nucleus, plastid	58.22	44.26
TraesCS1D01G206400.1	Wheat	cytosol	30.22	43.87
TraesCS3D01G511500.1	Wheat	nucleus	57.78	43.48
TraesCS1D01G206100.1	Wheat	cytosol	29.33	42.58
TraesCS3D01G511000.1	Wheat	cytosol	56.0	42.57
TraesCS3D01G039700.1	Wheat	cytosol	42.67	42.48
TraesCS3D01G510300.2	Wheat	nucleus	55.11	41.75
TraesCS3D01G510900.1	Wheat	nucleus	54.22	40.94
TraesCS3D01G511900.1	Wheat	mitochondrion	60.0	40.91
TraesCS7D01G442700.1	Wheat	cytosol, nucleus	52.0	38.36
TraesCS6D01G109600.1	Wheat	cytosol	36.44	35.81
TraesCS2D01G405500.1	Wheat	cytosol	36.0	35.53
TraesCS7D01G443100.1	Wheat	cytosol	36.0	35.37
TraesCS4D01G218300.1	Wheat	cytosol	19.11	34.96
TraesCS4D01G006900.1	Wheat	cytosol	19.11	33.33
TraesCS5D01G087500.1	Wheat	cytosol	33.78	33.19
TraesCS5D01G269800.1	Wheat	cytosol	19.11	31.85
TraesCS6D01G125600.1	Wheat	cytosol	46.22	31.52
TraesCS6D01G137400.1	Wheat	cytosol	18.67	31.11
TraesCS2D01G458600.1	Wheat	cytosol	19.56	30.99
TraesCS7D01G474200.1	Wheat	cytosol	19.11	30.94
TraesCS7D01G474300.1	Wheat	cytosol	19.11	30.94
TraesCS1D01G109800.1	Wheat	cytosol	20.89	30.32
TraesCS1D01G405400.1	Wheat	cytosol	20.89	30.32
TraesCS2D01G458700.1	Wheat	cytosol	19.11	30.28
TraesCS4D01G218400.1	Wheat	cytosol	20.0	29.8
TraesCS1D01G228700.1	Wheat	cytosol	18.22	29.5
TraesCS2D01G580700.1	Wheat	cytosol	18.22	29.5
TraesCS2D01G459200.1	Wheat	cytosol	17.78	28.99
TraesCS1D01G174700.1	Wheat	cytosol	20.44	28.4
TraesCS7D01G466600.1	Wheat	cytosol	19.11	28.1
TraesCS2D01G459000.1	Wheat	cytosol	16.89	27.54
TraesCS2D01G459100.1	Wheat	cytosol	16.89	27.54
TraesCS4D01G234300.1	Wheat	cytosol	19.11	27.22
TraesCS1D01G427100.1	Wheat	cytosol	24.0	23.79
CDX79728	Canola	cytosol	24.0	23.79
TraesCS5D01G194700.1	Wheat	cytosol	15.11	23.78
TraesCS7D01G100100.1	Wheat	cytosol	25.33	23.75
TraesCS2D01G092300.1	Wheat	cytosol	15.11	23.29
TraesCS2D01G092200.1	Wheat	cytosol	15.11	22.08
TraesCS5D01G391800.1	Wheat	mitochondrion	23.11	17.93
TraesCS7D01G024600.1	Wheat	cytosol, mitochondrion	28.89	17.71
TraesCS1D01G314000.1	Wheat	cytosol	32.44	12.37

Protein Annotations

EnsemblPlants:TraesCS3D01G510200.1	EnsemblPlantsGene:TraesCS3D01G510200	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR45095	PANTHER:PTHR45095:SF2
PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	SMART:SM00213	SUPFAM:SSF54236	MapMan:35.1

Description

No Description!

Coordinates

chr3D:+:595270826..595271503

Molecular Weight (calculated)

25486.0 Da

IEP (calculated)

8.082

GRAVY (calculated)

-0.246

Length

225 amino acids

Sequence
(BLAST)

001: MDVLIKNPTG STTPLRVYPS DTVRDVKAKI QEQYPLFFGG VQLDDSLTLA NYNIQHESTI DLREKMNMKV YVTETVAGRT ITINVNSLDT VDNLKSKIQD
101: LEGFPKAQQC LVFASTRLDD GNRTMIGHNI RNESTLLLVL LPCIPRGDMM QVFVRTLDGK TITLWVGSLD TVGSIKVKIY EMKYGPFPKQ QRLIFQGKQL
201: EDGHALADYS IHRDCTLHLM IRQHS

Best Arabidopsis Sequence Match ( AT4G02890.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.