Factsheet for TraesCS2D01G458700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G458100.1	Wheat	cytosol	99.3	99.3
TraesCS7D01G454100.1	Wheat	cytosol, golgi, unclear	52.82	97.4
TraesCS2D01G458600.1	Wheat	cytosol	94.37	94.37
Os09t0452700-00	Rice	cytosol, extracellular, plasma membrane, plastid	89.44	90.71
TraesCS5D01G269800.1	Wheat	cytosol	82.39	86.67
EER99330	Sorghum	cytosol	86.62	86.01
TraesCS4D01G218300.1	Wheat	cytosol	72.54	83.74
TraesCS4D01G006900.1	Wheat	cytosol	76.06	83.72
TraesCS1D01G228700.1	Wheat	cytosol	81.69	83.45
TraesCS6D01G137400.1	Wheat	cytosol	78.17	82.22
TraesCS7D01G474200.1	Wheat	cytosol	78.87	80.58
TraesCS7D01G474300.1	Wheat	cytosol	78.17	79.86
TraesCS2D01G580700.1	Wheat	cytosol	69.01	70.5
TraesCS4D01G218400.1	Wheat	cytosol	74.65	70.2
HORVU2Hr1G104410.26	Barley	cytosol	87.32	70.06
TraesCS2D01G459000.1	Wheat	cytosol	66.9	68.84
TraesCS2D01G459100.1	Wheat	cytosol	66.9	68.84
TraesCS4D01G234300.1	Wheat	cytosol	76.06	68.35
TraesCS2D01G459200.1	Wheat	cytosol	64.79	66.67
TraesCS5D01G194700.1	Wheat	cytosol	66.2	65.73
TraesCS2D01G092300.1	Wheat	cytosol	61.27	59.59
TraesCS2D01G092200.1	Wheat	cytosol	61.97	57.14
TraesCS1D01G405400.1	Wheat	cytosol	59.86	54.84
TraesCS1D01G109800.1	Wheat	cytosol	59.86	54.84
TraesCS7D01G442900.1	Wheat	cytosol	57.75	53.59
TraesCS6D01G248600.1	Wheat	cytosol	57.75	53.25
TraesCS1D01G174700.1	Wheat	cytosol	59.86	52.47
TraesCS5D01G231400.1	Wheat	cytosol	56.34	52.29
TraesCS7D01G494400.1	Wheat	cytosol	56.34	52.29
TraesCS7D01G453100.1	Wheat	cytosol	55.63	50.97
TraesCS7D01G143000.1	Wheat	cytosol	55.63	50.97
TraesCS1D01G206100.1	Wheat	cytosol	54.23	49.68
TraesCS6D01G136800.1	Wheat	cytosol	49.3	48.28
TraesCS1D01G206400.1	Wheat	cytosol	52.11	47.74
TraesCS6D01G109600.1	Wheat	cytosol	60.56	37.55
TraesCS2D01G405500.1	Wheat	cytosol	59.86	37.28
TraesCS7D01G443100.1	Wheat	cytosol	59.86	37.12
TraesCS7D01G442700.1	Wheat	cytosol, nucleus	60.56	28.2
TraesCS3D01G510800.1	Wheat	cytosol	43.66	27.68
TraesCS3D01G510400.1	Wheat	mitochondrion	43.66	27.68
TraesCS3D01G510500.1	Wheat	mitochondrion	21.13	26.32
TraesCS3D01G510600.1	Wheat	cytosol	40.85	25.89
TraesCS6D01G125600.1	Wheat	cytosol	59.86	25.76
TraesCS3D01G511200.1	Wheat	cytosol	35.21	22.52
TraesCS1D01G427100.1	Wheat	cytosol	35.92	22.47
TraesCS3D01G039700.1	Wheat	cytosol	34.51	21.68
TraesCS3D01G511000.1	Wheat	cytosol	40.85	19.59
TraesCS3D01G510700.1	Wheat	cytosol, nucleus, plastid	40.85	19.59
TraesCS3D01G510300.2	Wheat	nucleus	40.85	19.53
TraesCS3D01G510900.1	Wheat	nucleus	40.14	19.13
TraesCS3D01G510200.1	Wheat	cytosol	30.28	19.11
TraesCS3D01G511500.1	Wheat	nucleus	40.14	19.06
TraesCS7D01G100100.1	Wheat	cytosol	30.28	17.92
TraesCS3D01G511900.1	Wheat	mitochondrion	41.55	17.88
TraesCS5D01G391800.1	Wheat	mitochondrion	32.39	15.86
TraesCS7D01G024600.1	Wheat	cytosol, mitochondrion	40.85	15.8
TraesCS5D01G087500.1	Wheat	cytosol	19.72	12.23
TraesCS1D01G314000.1	Wheat	cytosol	39.44	9.49
TraesCS2D01G474700.1	Wheat	cytosol	4.23	7.79
TraesCS7D01G466600.1	Wheat	cytosol	7.75	7.19

Protein Annotations

MapMan:17.1.2.1.43	Gene3D:2.20.28.70	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR000626	InterPro:IPR038587	InterPro:L40e_sf	PFAM:PF00240	PFAM:PF01020
PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF255	InterPro:Ribosomal_L40e
InterPro:Ribosomal_zn-bd	SMART:SM00213	SMART:SM01377	SUPFAM:SSF54236	SUPFAM:SSF57829	EnsemblPlantsGene:TraesCS2D01G458700
EnsemblPlants:TraesCS2D01G458700.1	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	TIGR:cd01803
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:565515711..565517417

Molecular Weight (calculated)

16278.8 Da

IEP (calculated)

10.659

GRAVY (calculated)

-0.787

Length

142 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDSRTLADYN IQKESTLHLV LRLRGGSRGG YPKNLEPNLR ILAQKYNENK
101: LVCRRCYARL PARATNCRKK KCGHNNQLRE KKRFMSKFAN AS

Best Arabidopsis Sequence Match ( AT1G23410.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGAKKR KKKTYTKPKK IKHTHKKVKL
101: AVLQFYKVDG SGKVQRLKKE CPSVSCGPGT FMASHFDRHY CGKCGTTYVF KKADEE

Arabidopsis Description

RPS27AAUbiquitin-40S ribosomal protein S27a-1 [Source:UniProtKB/Swiss-Prot;Acc:P59271]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.