Factsheet for TraesCS3D01G510800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G504500.1	Wheat	cytosol	96.88	96.88
TraesCS3D01G510500.1	Wheat	mitochondrion	48.21	94.74
TraesCS3D01G510600.1	Wheat	cytosol	85.27	85.27
TraesCS3D01G510400.1	Wheat	mitochondrion	82.59	82.59
TraesCS6D01G248600.1	Wheat	cytosol	49.11	71.43
TraesCS7D01G442900.1	Wheat	cytosol	48.66	71.24
TraesCS7D01G454100.1	Wheat	cytosol, golgi, unclear	24.11	70.13
HORVU3Hr1G111000.1	Barley	cytosol	47.77	69.93
TraesCS7D01G453100.1	Wheat	cytosol	46.43	67.1
TraesCS2D01G474700.1	Wheat	cytosol	21.88	63.64
TraesCS3D01G510200.1	Wheat	cytosol	61.61	61.33
OQU83265	Sorghum	cytosol	59.38	60.18
TraesCS3D01G511200.1	Wheat	cytosol	59.38	59.91
TraesCS3D01G511500.1	Wheat	nucleus	79.02	59.2
TraesCS7D01G494400.1	Wheat	cytosol	39.73	58.17
TraesCS5D01G231400.1	Wheat	cytosol	39.73	58.17
TraesCS3D01G510700.1	Wheat	cytosol, nucleus, plastid	76.79	58.11
TraesCS6D01G136800.1	Wheat	cytosol	37.05	57.24
TraesCS3D01G511000.1	Wheat	cytosol	74.11	56.08
TraesCS3D01G510300.2	Wheat	nucleus	73.66	55.56
TraesCS7D01G143000.1	Wheat	cytosol	38.39	55.48
TraesCS3D01G510900.1	Wheat	nucleus	73.21	55.03
TraesCS3D01G511900.1	Wheat	mitochondrion	79.91	54.24
TraesCS1D01G206100.1	Wheat	cytosol	37.5	54.19
TraesCS1D01G206400.1	Wheat	cytosol	37.5	54.19
TraesCS3D01G039700.1	Wheat	cytosol	51.34	50.88
TraesCS4D01G218300.1	Wheat	cytosol	27.68	50.41
TraesCS7D01G442700.1	Wheat	cytosol, nucleus	67.86	49.84
TraesCS4D01G006900.1	Wheat	cytosol	28.12	48.84
TraesCS6D01G109600.1	Wheat	cytosol	49.55	48.47
TraesCS2D01G405500.1	Wheat	cytosol	49.11	48.25
TraesCS7D01G443100.1	Wheat	cytosol	49.11	48.03
TraesCS5D01G087500.1	Wheat	cytosol	46.43	45.41
TraesCS5D01G269800.1	Wheat	cytosol	27.23	45.19
TraesCS6D01G137400.1	Wheat	cytosol	26.79	44.44
TraesCS7D01G474200.1	Wheat	cytosol	27.23	43.88
TraesCS7D01G474300.1	Wheat	cytosol	27.23	43.88
TraesCS2D01G458600.1	Wheat	cytosol	27.68	43.66
TraesCS2D01G458700.1	Wheat	cytosol	27.68	43.66
TraesCS1D01G109800.1	Wheat	cytosol	29.91	43.23
TraesCS1D01G405400.1	Wheat	cytosol	29.91	43.23
TraesCS4D01G218400.1	Wheat	cytosol	28.57	42.38
TraesCS1D01G228700.1	Wheat	cytosol	25.89	41.73
TraesCS1D01G174700.1	Wheat	cytosol	29.91	41.36
TraesCS6D01G125600.1	Wheat	cytosol	59.38	40.3
TraesCS4D01G234300.1	Wheat	cytosol	28.12	39.87
TraesCS2D01G580700.1	Wheat	cytosol	24.11	38.85
TraesCS2D01G459100.1	Wheat	cytosol	23.66	38.41
TraesCS7D01G466600.1	Wheat	cytosol	25.45	37.25
TraesCS5D01G194700.1	Wheat	cytosol	23.66	37.06
TraesCS2D01G459200.1	Wheat	cytosol	22.77	36.96
TraesCS2D01G459000.1	Wheat	cytosol	22.77	36.96
TraesCS2D01G092300.1	Wheat	cytosol	21.43	32.88
TraesCS1D01G427100.1	Wheat	cytosol	33.04	32.6
TraesCS2D01G092200.1	Wheat	cytosol	21.43	31.17
CDX79728	Canola	cytosol	31.25	30.84
TraesCS7D01G100100.1	Wheat	cytosol	29.91	27.92
TraesCS5D01G391800.1	Wheat	mitochondrion	30.36	23.45
TraesCS7D01G024600.1	Wheat	cytosol, mitochondrion	31.7	19.35
TraesCS1D01G314000.1	Wheat	cytosol	39.73	15.08

Protein Annotations

EnsemblPlants:TraesCS3D01G510800.1	EnsemblPlantsGene:TraesCS3D01G510800	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF238
PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	SMART:SM00213	SUPFAM:SSF54236	MapMan:35.1

Description

No Description!

Coordinates

chr3D:+:595739175..595739849

Molecular Weight (calculated)

25538.9 Da

IEP (calculated)

8.273

GRAVY (calculated)

-0.379

Length

224 amino acids

Sequence
(BLAST)

001: MRIFVKTPTG STICLKVHSS DTLYTVKAKI QQQYRLFFDG VQLEDNRTLA DYGIQHDSTI DLQEKMQIYV TETRAGRTIT LEVDSLDTIS NVKSKIQDME
101: GFPKGQQCLI FANKQLEDDK RTLADHNIWK ESTLLLVLRP CRPGASRMMH IFVKPLKGKT LTLEVESSCT IDNVKVKIYE QKGTCPSQQR LIFAGKQLED
201: GRTLADYNIQ SENTVHLVYR LCGC

Best Arabidopsis Sequence Match ( AT4G02890.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.