Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G027400.1 | Wheat | cytosol | 57.49 | 96.79 |
| TraesCS7D01G454100.1 | Wheat | cytosol, golgi, unclear | 14.44 | 68.83 |
| TraesCS6D01G248600.1 | Wheat | cytosol | 26.98 | 64.29 |
| TraesCS7D01G442900.1 | Wheat | cytosol | 26.43 | 63.4 |
| TraesCS7D01G453100.1 | Wheat | cytosol | 25.61 | 60.65 |
| TraesCS6D01G109600.1 | Wheat | cytosol | 37.33 | 59.83 |
| TraesCS7D01G443100.1 | Wheat | cytosol | 37.06 | 59.39 |
| TraesCS2D01G405500.1 | Wheat | cytosol | 36.78 | 59.21 |
| PGSC0003DMT400057275 | Potato | cytosol | 28.88 | 55.79 |
| TraesCS5D01G231400.1 | Wheat | cytosol | 23.16 | 55.56 |
| TraesCS7D01G494400.1 | Wheat | cytosol | 23.16 | 55.56 |
| TraesCS7D01G466600.1 | Wheat | cytosol | 22.89 | 54.9 |
| TraesCS6D01G136800.1 | Wheat | cytosol | 21.53 | 54.48 |
| TraesCS7D01G143000.1 | Wheat | cytosol | 21.8 | 51.61 |
| TraesCS1D01G206100.1 | Wheat | cytosol | 21.8 | 51.61 |
| TraesCS1D01G206400.1 | Wheat | cytosol | 20.98 | 49.68 |
| Solyc11g005650.1.1 | Tomato | plasma membrane | 14.99 | 48.67 |
| Os06t0673500-01 | Rice | cytosol | 27.52 | 48.33 |
| TraesCS2D01G474700.1 | Wheat | cytosol | 10.08 | 48.05 |
| TraesCS4D01G218300.1 | Wheat | cytosol | 16.08 | 47.97 |
| TraesCS4D01G006900.1 | Wheat | cytosol | 16.35 | 46.51 |
| TraesCS7D01G442700.1 | Wheat | cytosol, nucleus | 37.87 | 45.57 |
| TraesCS6D01G137400.1 | Wheat | cytosol | 16.35 | 44.44 |
| TraesCS5D01G269800.1 | Wheat | cytosol | 16.35 | 44.44 |
| TraesCS2D01G580700.1 | Wheat | cytosol | 15.8 | 41.73 |
| TraesCS7D01G474300.1 | Wheat | cytosol | 15.8 | 41.73 |
| TraesCS7D01G474200.1 | Wheat | cytosol | 15.8 | 41.73 |
| TraesCS1D01G109800.1 | Wheat | cytosol | 17.44 | 41.29 |
| TraesCS1D01G405400.1 | Wheat | cytosol | 17.44 | 41.29 |
| TraesCS2D01G458600.1 | Wheat | cytosol | 15.8 | 40.85 |
| TraesCS2D01G458700.1 | Wheat | cytosol | 15.8 | 40.85 |
| TraesCS1D01G228700.1 | Wheat | cytosol | 15.26 | 40.29 |
| TraesCS1D01G174700.1 | Wheat | cytosol | 17.44 | 39.51 |
| TraesCS2D01G459200.1 | Wheat | cytosol | 14.71 | 39.13 |
| TraesCS4D01G218400.1 | Wheat | cytosol | 16.08 | 39.07 |
| TraesCS4D01G234300.1 | Wheat | cytosol | 16.35 | 37.97 |
| TraesCS2D01G459100.1 | Wheat | cytosol | 13.9 | 36.96 |
| TraesCS2D01G459000.1 | Wheat | cytosol | 13.9 | 36.96 |
| TraesCS6D01G125600.1 | Wheat | cytosol | 32.97 | 36.67 |
| TraesCS1D01G427100.1 | Wheat | cytosol | 21.25 | 34.36 |
| TraesCS5D01G194700.1 | Wheat | cytosol | 13.08 | 33.57 |
| TraesCS3D01G510400.1 | Wheat | mitochondrion | 20.16 | 33.04 |
| TraesCS3D01G510600.1 | Wheat | cytosol | 19.89 | 32.59 |
| TraesCS3D01G510800.1 | Wheat | cytosol | 19.35 | 31.7 |
| TraesCS2D01G092200.1 | Wheat | cytosol | 12.26 | 29.22 |
| TraesCS3D01G039700.1 | Wheat | cytosol | 17.98 | 29.2 |
| TraesCS3D01G510200.1 | Wheat | cytosol | 17.71 | 28.89 |
| TraesCS3D01G511200.1 | Wheat | cytosol | 17.44 | 28.83 |
| TraesCS2D01G092300.1 | Wheat | cytosol | 11.44 | 28.77 |
| TraesCS5D01G087500.1 | Wheat | cytosol | 16.89 | 27.07 |
| TraesCS5D01G391800.1 | Wheat | mitochondrion | 20.16 | 25.52 |
| TraesCS7D01G100100.1 | Wheat | cytosol | 16.35 | 25.0 |
| TraesCS3D01G511500.1 | Wheat | nucleus | 19.89 | 24.41 |
| TraesCS3D01G510700.1 | Wheat | cytosol, nucleus, plastid | 19.07 | 23.65 |
| TraesCS3D01G510900.1 | Wheat | nucleus | 19.07 | 23.49 |
| TraesCS3D01G511900.1 | Wheat | mitochondrion | 19.62 | 21.82 |
| TraesCS3D01G510300.2 | Wheat | nucleus | 17.44 | 21.55 |
| TraesCS3D01G511000.1 | Wheat | cytosol | 17.17 | 21.28 |
| TraesCS3D01G510500.1 | Wheat | mitochondrion | 5.72 | 18.42 |
| TraesCS1D01G314000.1 | Wheat | cytosol | 23.98 | 14.92 |
| HORVU6Hr1G026280.2 | Barley | plastid | 13.35 | 12.1 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G024600.1 | EnsemblPlantsGene:TraesCS7D01G024600 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PFAM:PF00240 | PFscan:PS50053 |
| PRINTS:PR00348 | SMART:SM00213 | SUPFAM:SSF54236 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7D:-:11606534..11609776
Molecular Weight (calculated)
41278.5 Da
IEP (calculated)
5.724
GRAVY (calculated)
-0.446
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLRQAVAHP RRRRQKMKIS VKTLTGKTIV IEVASSDTSD NIKDKIQEKE GIPPDQQRLI FNGRHLDAEW TVSDYNIQEQ STLHLVLRLG GPCTVCCYRY
101: INVQMLAGKT VSIEVDPTDT VDTIREKICA PQRLFFAGKQ LEDGRTIADY EFGNNISLHL DFGMQIFVKT AIGKTTTLLV EPSDTIDSIK EKIQGKQRII
201: FDGKQLDGQG TLTDYNIKRG STLYLRPSKN GDMQILVKTQ TSETIRLMFK LSDTIGDVKA KIQEKQRIMF EGRKLDDGRS TLADYDIQEE SILHLDFGME
301: IFVKTPTGKT ITLNVDPSDT VDSVKEKIHG NQILLFGGKE LESGQTLEDY DIQGGSTLHV EDCLTEG
101: INVQMLAGKT VSIEVDPTDT VDTIREKICA PQRLFFAGKQ LEDGRTIADY EFGNNISLHL DFGMQIFVKT AIGKTTTLLV EPSDTIDSIK EKIQGKQRII
201: FDGKQLDGQG TLTDYNIKRG STLYLRPSKN GDMQILVKTQ TSETIRLMFK LSDTIGDVKA KIQEKQRIMF EGRKLDDGRS TLADYDIQEE SILHLDFGME
301: IFVKTPTGKT ITLNVDPSDT VDSVKEKIHG NQILLFGGKE LESGQTLEDY DIQGGSTLHV EDCLTEG
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG F
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG F
Arabidopsis Description
UBQ10Polyubiquitin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8H159]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.