Factsheet for TraesCS1D01G174700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G166000.1	Wheat	unclear	100.0	100.0
TraesCS1B01G182700.1	Wheat	cytosol	100.0	100.0
TraesCS7D01G454100.1	Wheat	cytosol, golgi, unclear	46.91	98.7
TraesCS1D01G109800.1	Wheat	cytosol	82.72	86.45
TraesCS1D01G405400.1	Wheat	cytosol	82.1	85.81
TraesCS4D01G218300.1	Wheat	cytosol	51.23	67.48
TraesCS4D01G006900.1	Wheat	cytosol	52.47	65.89
TraesCS5D01G269800.1	Wheat	cytosol	50.62	60.74
TraesCS2D01G458700.1	Wheat	cytosol	52.47	59.86
TraesCS2D01G458600.1	Wheat	cytosol	52.47	59.86
TraesCS7D01G474200.1	Wheat	cytosol	51.23	59.71
TraesCS6D01G137400.1	Wheat	cytosol	49.38	59.26
TraesCS7D01G474300.1	Wheat	cytosol	50.62	58.99
Zm00001d032616_P001	Maize	plastid	56.17	58.33
TraesCS1D01G228700.1	Wheat	cytosol	49.38	57.55
KXG38267	Sorghum	cytosol	56.79	57.5
TraesCS7D01G442900.1	Wheat	cytosol	53.7	56.86
TraesCS6D01G248600.1	Wheat	cytosol	53.7	56.49
TraesCS4D01G218400.1	Wheat	cytosol	52.47	56.29
TraesCS2D01G580700.1	Wheat	cytosol	48.15	56.12
TraesCS5D01G231400.1	Wheat	cytosol	52.47	55.56
TraesCS7D01G494400.1	Wheat	cytosol	52.47	55.56
TraesCS7D01G453100.1	Wheat	cytosol	51.85	54.19
TraesCS7D01G143000.1	Wheat	cytosol	51.85	54.19
TraesCS4D01G234300.1	Wheat	cytosol	52.47	53.8
TraesCS1D01G206100.1	Wheat	cytosol	50.62	52.9
Os10t0491801-00	Rice	cytosol	47.53	52.38
TraesCS6D01G136800.1	Wheat	cytosol	46.3	51.72
TraesCS2D01G459200.1	Wheat	cytosol	43.83	51.45
TraesCS1D01G206400.1	Wheat	cytosol	48.77	50.97
TraesCS2D01G459000.1	Wheat	cytosol	43.21	50.72
TraesCS2D01G459100.1	Wheat	cytosol	43.21	50.72
TraesCS5D01G194700.1	Wheat	cytosol	42.59	48.25
TraesCS2D01G092300.1	Wheat	cytosol	37.04	41.1
TraesCS6D01G109600.1	Wheat	cytosol	58.02	41.05
TraesCS2D01G405500.1	Wheat	cytosol	57.41	40.79
TraesCS7D01G443100.1	Wheat	cytosol	57.41	40.61
TraesCS2D01G092200.1	Wheat	cytosol	37.65	39.61
HORVU1Hr1G043930.8	Barley	plastid	99.38	38.24
TraesCS7D01G442700.1	Wheat	cytosol, nucleus	58.02	30.82
TraesCS3D01G510800.1	Wheat	cytosol	41.36	29.91
TraesCS3D01G510400.1	Wheat	mitochondrion	40.12	29.02
TraesCS6D01G125600.1	Wheat	cytosol	57.41	28.18
TraesCS3D01G510600.1	Wheat	cytosol	38.89	28.12
TraesCS3D01G510500.1	Wheat	mitochondrion	18.52	26.32
TraesCS1D01G427100.1	Wheat	cytosol	35.19	25.11
TraesCS3D01G039700.1	Wheat	cytosol	32.1	23.01
TraesCS3D01G511200.1	Wheat	cytosol	31.48	22.97
TraesCS3D01G511000.1	Wheat	cytosol	40.74	22.3
TraesCS3D01G510700.1	Wheat	cytosol, nucleus, plastid	40.12	21.96
TraesCS3D01G510300.2	Wheat	nucleus	40.12	21.89
TraesCS7D01G100100.1	Wheat	cytosol	30.86	20.83
TraesCS3D01G510900.1	Wheat	nucleus	37.65	20.47
TraesCS3D01G510200.1	Wheat	cytosol	28.4	20.44
TraesCS3D01G511500.1	Wheat	nucleus	35.8	19.4
TraesCS3D01G511900.1	Wheat	mitochondrion	38.89	19.09
TraesCS5D01G391800.1	Wheat	mitochondrion	32.1	17.93
TraesCS7D01G024600.1	Wheat	cytosol, mitochondrion	39.51	17.44
TraesCS5D01G087500.1	Wheat	cytosol	19.75	13.97
TraesCS7D01G466600.1	Wheat	cytosol	11.11	11.76
TraesCS2D01G474700.1	Wheat	cytosol	5.56	11.69
TraesCS1D01G314000.1	Wheat	cytosol	37.65	10.34

Protein Annotations

MapMan:17.1.3.1.29	Gene3D:2.20.25.660	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR000626	InterPro:IPR038582	PFAM:PF00240	PFAM:PF01599	PRINTS:PR00348
ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF235	InterPro:Ribosomal_S27a	InterPro:Ribosomal_zn-bd
InterPro:S27a-like_sf	SMART:SM00213	SMART:SM01402	SUPFAM:SSF54236	SUPFAM:SSF57829	EnsemblPlantsGene:TraesCS1D01G174700
EnsemblPlants:TraesCS1D01G174700.1	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	TIGR:cd01803
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:248984256..248984744

Molecular Weight (calculated)

18066.6 Da

IEP (calculated)

9.369

GRAVY (calculated)

-0.733

Length

162 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGAKKR KKKTYSTPKK VKHEREKTPL
101: AVLGYYRVDD ATGKVERLRK ECPNPDCGAG TFMAAHADRH ACGKCGLTYA YAEAQSPEID SD

Best Arabidopsis Sequence Match ( AT2G47110.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGAKKR KKKTYTKPKK IKHKHKKVKL
101: AVLQFYKVDG SGKVQRLRKE CPNATCGAGT FMASHFDRHY CGKCGLTYVY QKEGAQE

Arabidopsis Description

RPS27ABUBQ6 [Source:UniProtKB/TrEMBL;Acc:A0A178VYW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.