Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G510800.1 | Wheat | cytosol | 94.74 | 48.21 |
| TraesCS3D01G510600.1 | Wheat | cytosol | 91.23 | 46.43 |
| TraesCS3D01G510400.1 | Wheat | mitochondrion | 89.47 | 45.54 |
| TraesCS7D01G454100.1 | Wheat | cytosol, golgi, unclear | 26.32 | 38.96 |
| OQU83265 | Sorghum | cytosol | 70.18 | 36.2 |
| TraesCS3D01G511500.1 | Wheat | nucleus | 91.23 | 34.78 |
| TraesCS3B01G568000.1 | Wheat | cytosol | 86.84 | 33.22 |
| TraesCS3D01G511000.1 | Wheat | cytosol | 83.33 | 32.09 |
| TraesCS3D01G510700.1 | Wheat | cytosol, nucleus, plastid | 83.33 | 32.09 |
| TraesCS3D01G510200.1 | Wheat | cytosol | 63.16 | 32.0 |
| TraesCS3D01G510300.2 | Wheat | nucleus | 80.7 | 30.98 |
| HORVU3Hr1G111000.1 | Barley | cytosol | 40.35 | 30.07 |
| TraesCS3D01G511200.1 | Wheat | cytosol | 57.89 | 29.73 |
| TraesCS3D01G511900.1 | Wheat | mitochondrion | 85.96 | 29.7 |
| TraesCS3D01G510900.1 | Wheat | nucleus | 76.32 | 29.19 |
| TraesCS3D01G039700.1 | Wheat | cytosol | 53.51 | 26.99 |
| TraesCS7D01G442700.1 | Wheat | cytosol, nucleus | 62.28 | 23.28 |
| TraesCS4D01G006900.1 | Wheat | cytosol | 26.32 | 23.26 |
| TraesCS4D01G218300.1 | Wheat | cytosol | 24.56 | 22.76 |
| TraesCS5D01G269800.1 | Wheat | cytosol | 26.32 | 22.22 |
| TraesCS6D01G137400.1 | Wheat | cytosol | 26.32 | 22.22 |
| TraesCS7D01G474200.1 | Wheat | cytosol | 26.32 | 21.58 |
| TraesCS7D01G474300.1 | Wheat | cytosol | 26.32 | 21.58 |
| TraesCS6D01G125600.1 | Wheat | cytosol | 62.28 | 21.52 |
| TraesCS2D01G458700.1 | Wheat | cytosol | 26.32 | 21.13 |
| TraesCS2D01G458600.1 | Wheat | cytosol | 26.32 | 21.13 |
| TraesCS1D01G228700.1 | Wheat | cytosol | 25.44 | 20.86 |
| TraesCS4D01G218400.1 | Wheat | cytosol | 26.32 | 19.87 |
| TraesCS7D01G494400.1 | Wheat | cytosol | 26.32 | 19.61 |
| TraesCS5D01G231400.1 | Wheat | cytosol | 26.32 | 19.61 |
| TraesCS7D01G442900.1 | Wheat | cytosol | 26.32 | 19.61 |
| TraesCS6D01G248600.1 | Wheat | cytosol | 26.32 | 19.48 |
| TraesCS1D01G109800.1 | Wheat | cytosol | 26.32 | 19.35 |
| TraesCS1D01G405400.1 | Wheat | cytosol | 26.32 | 19.35 |
| TraesCS7D01G143000.1 | Wheat | cytosol | 26.32 | 19.35 |
| TraesCS4D01G234300.1 | Wheat | cytosol | 26.32 | 18.99 |
| TraesCS1D01G206100.1 | Wheat | cytosol | 25.44 | 18.71 |
| TraesCS1D01G206400.1 | Wheat | cytosol | 25.44 | 18.71 |
| TraesCS1D01G174700.1 | Wheat | cytosol | 26.32 | 18.52 |
| TraesCS7D01G453100.1 | Wheat | cytosol | 24.56 | 18.06 |
| TraesCS2D01G459100.1 | Wheat | cytosol | 21.05 | 17.39 |
| TraesCS6D01G136800.1 | Wheat | cytosol | 21.93 | 17.24 |
| TraesCS5D01G194700.1 | Wheat | cytosol | 21.05 | 16.78 |
| TraesCS2D01G459000.1 | Wheat | cytosol | 20.18 | 16.67 |
| TraesCS2D01G580700.1 | Wheat | cytosol | 20.18 | 16.55 |
| TraesCS2D01G459200.1 | Wheat | cytosol | 19.3 | 15.94 |
| TraesCS5D01G087500.1 | Wheat | cytosol | 28.07 | 13.97 |
| TraesCS2D01G092300.1 | Wheat | cytosol | 17.54 | 13.7 |
| TraesCS2D01G092200.1 | Wheat | cytosol | 18.42 | 13.64 |
| TraesCS2D01G405500.1 | Wheat | cytosol | 26.32 | 13.16 |
| TraesCS6D01G109600.1 | Wheat | cytosol | 26.32 | 13.1 |
| TraesCS7D01G443100.1 | Wheat | cytosol | 25.44 | 12.66 |
| TraesCS1D01G427100.1 | Wheat | cytosol | 24.56 | 12.33 |
| CDX79728 | Canola | cytosol | 18.42 | 9.25 |
| TraesCS7D01G100100.1 | Wheat | cytosol | 13.16 | 6.25 |
| TraesCS5D01G391800.1 | Wheat | mitochondrion | 15.79 | 6.21 |
| TraesCS7D01G024600.1 | Wheat | cytosol, mitochondrion | 18.42 | 5.72 |
| TraesCS1D01G314000.1 | Wheat | cytosol | 28.95 | 5.59 |
| TraesCS2D01G474700.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS7D01G466600.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G510500.1 | EnsemblPlantsGene:TraesCS3D01G510500 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PANTHER:PTHR10666 | PANTHER:PTHR10666:SF231 |
| PFAM:PF00240 | PFscan:PS50053 | PRINTS:PR00348 | SMART:SM00213 | SUPFAM:SSF54236 | MapMan:35.1 |
Description
No Description!
Coordinates
chr3D:+:595302609..595304011
Molecular Weight (calculated)
13028.7 Da
IEP (calculated)
6.517
GRAVY (calculated)
-0.417
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MRIFVKTPTG RTICLKVHSS DTLYTVKAKI QQQYRLVFDG VQLEDNRTLA DYGIQHDSTI DLQEKMQIYV TETREGRTIA LEVDSLDTIG NVKSKIEDME
101: GFPKGQQCLI FANK
101: GFPKGQQCLI FANK
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGF
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGF
Arabidopsis Description
UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.