Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23226 | Canola | cytosol, nucleus, plastid | 19.82 | 63.38 |
| CDY71299 | Canola | cytosol | 22.47 | 62.2 |
| CDY71775 | Canola | cytosol | 22.47 | 61.45 |
| CDY39163 | Canola | cytosol | 26.43 | 59.41 |
| TraesCS7D01G453100.1 | Wheat | cytosol | 40.09 | 58.71 |
| CDY70361 | Canola | cytosol | 25.99 | 56.19 |
| CDX95544 | Canola | cytosol | 18.06 | 53.25 |
| CDY27155 | Canola | cytosol | 34.36 | 50.65 |
| CDY12428 | Canola | cytosol | 34.36 | 50.65 |
| CDY50712 | Canola | cytosol | 34.8 | 50.64 |
| CDX77550 | Canola | cytosol | 34.36 | 50.0 |
| CDY31710 | Canola | cytosol | 34.36 | 49.37 |
| CDX84182 | Canola | cytosol | 34.36 | 49.06 |
| TraesCS3A01G504300.1 | Wheat | cytosol | 29.07 | 42.04 |
| CDX79660 | Canola | cytosol | 23.35 | 41.41 |
| CDX84153 | Canola | cytosol | 23.35 | 41.41 |
| CDX84576 | Canola | cytosol | 23.35 | 41.41 |
| CDX95351 | Canola | cytosol | 23.35 | 41.41 |
| CDX78108 | Canola | cytosol | 23.35 | 41.41 |
| CDX75066 | Canola | cytosol | 23.35 | 41.41 |
| CDX75065 | Canola | cytosol | 23.35 | 41.41 |
| TraesCS3A01G504200.1 | Wheat | cytosol | 28.63 | 41.4 |
| CDX73619 | Canola | cytosol | 23.35 | 41.09 |
| TraesCS3A01G040300.1 | Wheat | cytosol | 28.19 | 41.03 |
| CDY12472 | Canola | cytosol | 26.43 | 38.46 |
| CDY25783 | Canola | cytosol | 26.43 | 38.46 |
| CDY44146 | Canola | cytosol | 26.43 | 38.46 |
| CDY04715 | Canola | cytosol | 26.43 | 38.46 |
| CDY25100 | Canola | cytosol | 26.43 | 38.22 |
| CDX67885 | Canola | cytosol | 26.43 | 38.22 |
| CDX76623 | Canola | cytosol | 26.43 | 38.22 |
| CDX83344 | Canola | cytosol | 26.43 | 38.22 |
| CDX93983 | Canola | cytosol | 26.43 | 38.22 |
| CDY66301 | Canola | cytosol | 26.43 | 38.22 |
| CDY50916 | Canola | cytosol | 26.43 | 38.22 |
| CDY11410 | Canola | cytosol | 26.43 | 38.22 |
| TraesCS3A01G503800.1 | Wheat | cytosol | 20.26 | 37.4 |
| TraesCS3B01G043200.1 | Wheat | cytosol | 22.91 | 36.62 |
| CDX79186 | Canola | golgi, vacuole | 25.11 | 34.97 |
| CDY46367 | Canola | cytosol | 23.35 | 34.64 |
| HORVU3Hr1G111000.1 | Barley | cytosol | 22.91 | 33.99 |
| TraesCS1D01G427100.1 | Wheat | cytosol | 33.04 | 33.04 |
| CDY00254 | Canola | cytosol | 15.42 | 33.02 |
| CDY29243 | Canola | cytosol | 35.68 | 32.79 |
| TraesCS3D01G510600.1 | Wheat | cytosol | 30.84 | 31.25 |
| TraesCS3D01G510800.1 | Wheat | cytosol | 30.84 | 31.25 |
| TraesCS3A01G504500.1 | Wheat | cytosol | 30.4 | 30.8 |
| TraesCS3D01G510400.1 | Wheat | mitochondrion | 30.4 | 30.8 |
| TraesCS3A01G504100.1 | Wheat | cytosol, mitochondrion | 29.52 | 29.91 |
| TraesCS3B01G567200.1 | Wheat | mitochondrion | 29.07 | 29.46 |
| TraesCS3B01G567300.1 | Wheat | mitochondrion | 27.75 | 28.9 |
| TraesCS3A01G504400.1 | Wheat | cytosol | 28.19 | 28.57 |
| TraesCS3D01G511200.1 | Wheat | cytosol | 27.31 | 27.93 |
| KXG28223 | Sorghum | mitochondrion | 25.99 | 27.44 |
| TraesCS3D01G039700.1 | Wheat | cytosol | 27.31 | 27.43 |
| HORVU3Hr1G110900.1 | Barley | cytosol | 26.43 | 26.67 |
| TraesCS3A01G040600.1 | Wheat | cytosol | 27.31 | 26.5 |
| TraesCS3B01G569000.1 | Wheat | mitochondrion | 25.99 | 26.34 |
| TraesCS3B01G567800.1 | Wheat | mitochondrion | 25.55 | 25.89 |
| OQU83265 | Sorghum | cytosol | 23.79 | 24.43 |
| TraesCS3D01G510200.1 | Wheat | cytosol | 23.79 | 24.0 |
| TraesCS3D01G510700.1 | Wheat | cytosol, nucleus, plastid | 30.4 | 23.31 |
| TraesCS3A01G504600.1 | Wheat | nucleus | 30.4 | 23.15 |
| TraesCS3B01G572400.1 | Wheat | cytosol, mitochondrion | 15.42 | 23.03 |
| TraesCS4B01G387300.1 | Wheat | cytosol | 32.6 | 22.98 |
| TraesCS3D01G511000.1 | Wheat | cytosol | 29.96 | 22.97 |
| TraesCS3B01G567100.1 | Wheat | nucleus | 29.52 | 22.56 |
| TraesCS3B01G567400.1 | Wheat | cytosol | 29.52 | 22.56 |
| TraesCS3D01G510900.1 | Wheat | nucleus | 29.52 | 22.48 |
| TraesCS3B01G569700.1 | Wheat | cytosol | 31.28 | 22.12 |
| TraesCSU01G124300.1 | Wheat | cytosol | 29.07 | 22.0 |
| TraesCS3D01G510300.2 | Wheat | nucleus | 28.63 | 21.89 |
| HORVU3Hr1G110970.1 | Barley | cytosol, nucleus, plastid | 28.19 | 21.84 |
| TraesCS3A01G504000.1 | Wheat | cytosol | 28.63 | 21.81 |
| TraesCS3D01G511900.1 | Wheat | mitochondrion | 31.28 | 21.52 |
| TraesCS7B01G486200.1 | Wheat | cytosol | 27.31 | 21.31 |
| TraesCS3A01G503700.1 | Wheat | cytosol, mitochondrion | 14.54 | 21.29 |
| TraesCS3D01G511500.1 | Wheat | nucleus | 27.75 | 21.07 |
| TraesCS3B01G568000.1 | Wheat | cytosol | 27.31 | 20.81 |
| TraesCS1B01G325300.1 | Wheat | cytosol | 36.12 | 20.65 |
| TraesCS3D01G510500.1 | Wheat | mitochondrion | 9.25 | 18.42 |
| HORVU4Hr1G089720.1 | Barley | nucleus | 31.72 | 18.18 |
| TraesCS4B01G389100.1 | Wheat | endoplasmic reticulum | 16.74 | 18.01 |
| TraesCS3B01G568900.1 | Wheat | mitochondrion | 11.01 | 17.86 |
| TraesCSU01G140400.1 | Wheat | nucleus | 30.4 | 17.51 |
| TraesCSU01G035100.1 | Wheat | nucleus | 26.43 | 17.34 |
| TraesCS1D01G314000.1 | Wheat | cytosol | 35.68 | 13.73 |
| TraesCS1A01G313500.3 | Wheat | cytosol, plastid | 35.24 | 13.49 |
Protein Annotations
| EnsemblPlants:CDX79728 | EnsemblPlantsGene:GSBRNA2T00132545001 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PANTHER:PTHR10666 | PANTHER:PTHR10666:SF239 |
| PFAM:PF00240 | PFscan:PS50053 | PRINTS:PR00348 | ProteinID:CDX79728 | ProteinID:CDX79728.1 | SEG:seg |
| SMART:SM00213 | SUPFAM:SSF54236 | UniParc:UPI0004EE6170 | MapMan:35.1 | : | : |
Description
BnaC03g20640D
Coordinates
chrLK031818:-:1935004..1936137
Molecular Weight (calculated)
25563.2 Da
IEP (calculated)
9.422
GRAVY (calculated)
0.032
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIFVKTLSG RTLFTLEVES SDTVDSVKEK IQDKVGIPPD HLSLTFAGEL LIASRTLDYY DIHDKSTLIM QIYVKTLTGK VFPLSVESSK TIYDVMKKIS
101: DVEGIPSSMQ RLIFNDQQLQ YGRTLGYYNV PKESTLFLVL RFRGGGGGFR TTITIEPLLG KTLILRIESA SNPITDIPLP SPALPSGVDT LSSTWLEYLL
201: SFLITIKGYS EKWGLRLSWV LFSRIRR
101: DVEGIPSSMQ RLIFNDQQLQ YGRTLGYYNV PKESTLFLVL RFRGGGGGFR TTITIEPLLG KTLILRIESA SNPITDIPLP SPALPSGVDT LSSTWLEYLL
201: SFLITIKGYS EKWGLRLSWV LFSRIRR
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF
Arabidopsis Description
UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.